Halorarum salinum: HUG12_18030
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Entry
HUG12_18030 CDS
T06744
Name
(GenBank) peptide chain release factor aRF-1
KO
K03265
peptide chain release factor subunit 1
Organism
halu
Halorarum salinum
Pathway
halu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
halu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HUG12_18030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halu03019
]
HUG12_18030
03012 Translation factors [BR:
halu03012
]
HUG12_18030
Messenger RNA biogenesis [BR:
halu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
HUG12_18030
Translation factors [BR:
halu03012
]
Eukaryotic type
Release factors
HUG12_18030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Zn_Ribbon_TF
Peptidase_M75
DUF7562
Motif
Other DBs
NCBI-ProteinID:
QLG63521
UniProt:
A0A7D5QFK0
LinkDB
All DBs
Position
3565279..3566538
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AA seq
419 aa
AA seq
DB search
MSSDAEDGNAPSEDRRKYEFRKILDQLDEYEGSGTQLVTIYIPEDRQISDVVAHVTQEHS
EASNIKSKQTRTNVQDALTSIKDRLRYYDTFPPEKGMVIFSGAVDSGGGQTEMVTEVLES
PPDPVESFRYHCDSNFLTGPLEDMMADKGLFGLIVLDRREANVGWLKGKRVEPVKSASSL
VPGKQRKGGQSAQRFARLRLEAIDNFYQEVAGMANELFVPKRHELDGILVGGPSPTKDEF
LDGDYLHHEIQDNVLGKFDVAYTDESGLYDVVDAAQEVLADQEILQDKREMEEFFEKLHT
GEEATYGFDETRRNLVMGAVDRLLVSEDLHHDVVPFECPNGHEEYEVVERRHSTPEHTCS
SCGEEAEPGEREDVVEHLMNIADQRGTETKFISTDFEKGEQLMDAFGGVAGILRYRTGV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcgacgccgaggacgggaacgcgccctccgaggaccgccggaagtacgagttc
cggaagatcctcgaccagctggacgagtacgagggctccgggacccagctcgtcaccatc
tacatccccgaggacaggcagatctccgacgtggtcgcacacgtcacacaggagcacagc
gaggcgtccaacatcaaatccaagcagacgcggacgaacgtccaggacgcgctcacctcc
atcaaggaccgcctccgctactacgacaccttcccgccggagaaggggatggtcatcttc
tcgggcgcggtcgactccggtggcggccagaccgagatggtgaccgaggtgctcgagtcc
ccgcccgaccccgtcgagtcgttccgctaccactgcgactcgaacttcctgacggggccg
ctggaggacatgatggccgacaaggggctgttcgggctcatcgtcctcgacaggcgcgag
gcgaacgtcggctggctgaagggcaagcgcgtcgagccggtgaagtcggcctcctcgctc
gtccccggcaagcagcggaagggcggtcagtccgcccagcggttcgcccgcctgcggctg
gaggccatcgacaacttctaccaggaggtcgcggggatggcgaacgaactgttcgtcccg
aagcggcacgaactcgacggcatcctggttggcggcccgtcgccgacgaaggacgagttc
ctcgacggcgactacctccaccacgagatccaggacaacgtgctcggcaagttcgacgtg
gcctacaccgacgagtcgggcctctacgacgtcgtcgacgccgcccaggaggtgctcgcc
gaccaggagatccttcaggacaagcgggagatggaggagttcttcgagaagctccacacc
ggcgaggaggccacctacggcttcgacgagacccggcggaacctcgtcatgggcgcggtc
gaccgcctgctggtctcggaggacctccaccacgacgtcgtcccgttcgagtgccccaac
ggccacgaggagtacgaggtcgtcgagcggcgccactcgacgcccgagcacacctgttcc
agttgcggggaggaggccgagcccggcgagcgcgaggacgtggtcgaacacctgatgaac
atcgccgaccagcgcggcaccgagacgaagttcatctccacggacttcgagaagggcgaa
cagctcatggacgcgttcggcggcgtcgccggcatcctccggtaccggacgggcgtctaa
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