Halorarum salinum: HUG12_18265
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Entry
HUG12_18265 CDS
T06744
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
halu
Halorarum salinum
Pathway
halu03030
DNA replication
halu03420
Nucleotide excision repair
halu03430
Mismatch repair
halu03440
Homologous recombination
halu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
halu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUG12_18265
03420 Nucleotide excision repair
HUG12_18265
03430 Mismatch repair
HUG12_18265
03440 Homologous recombination
HUG12_18265
03460 Fanconi anemia pathway
HUG12_18265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halu03000
]
HUG12_18265
03032 DNA replication proteins [BR:
halu03032
]
HUG12_18265
03400 DNA repair and recombination proteins [BR:
halu03400
]
HUG12_18265
Transcription factors [BR:
halu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
HUG12_18265
DNA replication proteins [BR:
halu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
HUG12_18265
DNA repair and recombination proteins [BR:
halu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
HUG12_18265
MMR (mismatch excision repair)
HUG12_18265
DSBR (double strand breaks repair)
HR (homologous recombination)
HUG12_18265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
REPA_OB_2
OB_Ssb-like
Motif
Other DBs
NCBI-ProteinID:
QLG63565
UniProt:
A0A7D5QMK6
LinkDB
All DBs
Position
3612055..3613545
Genome browser
AA seq
496 aa
AA seq
DB search
MGDIEDVYEDVETDVPFEEFEAAVEDKVEQMGGLADEETAAMLIAHELRDEEVNSIADIK
PGMDDVKFLAKVMKVGEVRTFERDGEDDDGHVLNVEVADESGRVTASMWDGMAVDAAETL
SQGDVLRIMGRPKEGYSGLEVAVDKAEPDEDAEVDVEATDEYRVEDLSLGVSDVNLLGKV
LDTDSIRTFDRDDGTEGRVANLTVGDETGRIRVTLWDERADRAEDLDAGTVVEVVDGYVR
ERDGSLELHVGNRGAVEETDADVEYVPETTDIAALELGDTVDVAGGVIETDEKRTFDRDD
GSEGQVRNVRIKDETGEIRVALWGEKADAGIDLADRVVFTDVEIQDGWQDDLEASAGWRS
TVSVLDGDAPAAPSTSRGSAGGGADSGSGDRDAGQGGLSSFADEAAATDAASADSAAADA
DGTTDGGDAVADGADGGGGGGVVEFTGTVVQAGDPVILDNGSETRSVDTGAKLRLGEEVT
VRGTEQDGAIDAEDVF
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacatagaggacgtctacgaggacgtggagaccgacgtccccttcgaggagttc
gaggccgccgtcgaggacaaggtcgagcagatgggcgggctggccgacgaggagacggcc
gcgatgctcatcgcccacgaactccgcgacgaggaggtgaactcgatcgccgacatcaag
ccggggatggacgacgtgaagttcctcgcgaaggtgatgaaggtcggcgaggtccgcacg
ttcgagcgggacggcgaggacgatgacggccacgtgctcaacgtggaggtcgccgacgag
tccggccgcgtcaccgcctcgatgtgggacgggatggccgtcgacgccgccgagacgctg
agccagggcgacgtgctccggatcatggggcgaccgaaggaggggtacagcggcctggag
gtcgccgtcgacaaggccgagccggacgaggacgccgaggtcgacgtggaggcgaccgac
gagtaccgggtggaggacctctcgctcggcgtctcggacgtgaacctcctcgggaaggtg
ctcgacaccgactccatccggacgttcgaccgcgacgacggcaccgagggccgcgtcgcg
aacctcacggtcggcgacgaaaccggccgcatccgggtcaccctctgggacgaacgggcg
gaccgggccgaggacctcgacgccggaaccgtcgtcgaggtcgtggacggctacgtccgc
gagcgcgacggctcgctggaactccacgtcggcaatcgaggcgccgtcgaggagaccgac
gccgacgtggagtacgtccccgagacgaccgacatcgcggcgctcgaactgggcgacacc
gtcgacgtcgccggcggcgtcatcgagacggacgagaagcgcaccttcgaccgtgacgac
ggctcggaggggcaggtccggaacgtccgcatcaaggacgagacgggcgagatccgcgtc
gcgctgtggggcgagaaggccgacgcggggatcgacctcgcggaccgggtcgtcttcacc
gacgtcgagatccaggacggctggcaggacgacctcgaggcgtcggcgggctggcggtcg
accgtctcggtgctggacggcgacgcgccggccgcgccgtccacgtcgcgcgggtcggcc
ggcggcggtgccgactccggctccggggaccgcgacgccggccagggcgggctctcctcg
ttcgccgacgaggccgccgcgacggacgccgcgtcggccgactcggcggcggccgacgcc
gatggaaccaccgacggcggcgacgcggtcgccgacggagccgacgggggcggcgggggc
ggcgtcgtggagttcaccgggacggtcgtgcaggccggcgacccggtcatcctcgacaac
ggttcggagacgcggagcgtcgacacgggtgcgaagctccggctgggggaggaggtgacc
gtccgggggaccgagcaggacggcgccatcgacgccgaggacgtgttctag
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