Halorarum salinum: HUG12_19335
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Entry
HUG12_19335 CDS
T06744
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halu
Halorarum salinum
Pathway
halu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HUG12_19335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halu03021
]
HUG12_19335
Transcription machinery [BR:
halu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HUG12_19335
Prokaryotic type
Archaeal type
TFB
HUG12_19335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Zn_ribbon_tTFIIB
DZR
Cas12f1-like_TNB
Trm112p
Cyclin_C
DZR_2
Sigma70_r4_2
Zn_ribbon_RPB9
Cyclin_N
DUF7129
Zn_ribbon_LysW
Zn_ribbon_IS1595
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
QLG63760
UniProt:
A0A7D5QE54
LinkDB
All DBs
Position
3821999..3823030
Genome browser
AA seq
343 aa
AA seq
DB search
MSNAKQFRQNRREHRADEHEVNADERESAGERESADERQVCPECGGTLASDERRGETVCR
DCGLVVDTDEIDRGPEWRAFDAAEKDEKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNQL
SGNQRRRMSRLRTWNERFRTSDHQERNLKQALGEIERMASALGLPESVRETASVIYRQAL
EKDMLPGRSIEGISTASLHAAARMANVPRSIDEVARVSRVDEETFERAYRYVVRELSLEI
EPADPAEYLPRFASELGVSDEAERQARELLETAKEANVHSGKSPVGLAAAAIYAAGILTN
EKLTQSEVSEVTDMSEVTIRNRYQELLAAREDAVGFGAGRATA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgcaaaacagttccgacagaaccggcgagagcaccgagcggacgaacacgag
gtgaacgcggacgagcgggagtcggccggcgagcgggagtcggccgacgagcggcaggtc
tgtcccgagtgtggcggcaccctggcgtccgacgagcgccgcggcgagacggtgtgtcgc
gactgcgggctcgtcgtcgacaccgacgagatcgaccgcgggcccgagtggcgcgcgttc
gacgccgccgagaaggacgagaagagccgcgtcggcgcccccacgaccaacatgatgcac
gacaaggggctctcgacgaacatcggctggcaggacaaggacgcctacggcaaccagctc
tcgggcaaccagcggcgccggatgtcgcggctccgcacctggaacgagcggttccgcacc
tccgaccaccaggagcggaacctgaagcaggcgctcggcgagatcgagcggatggccagc
gcgctcggcctcccggagagcgtccgcgagaccgcctcggtcatctaccggcaggcgctg
gagaaggacatgctgccgggccggtccatcgagggcatctccaccgccagcctccacgcg
gccgcgcggatggcgaacgtcccgcgctcgatcgacgaggtcgcgcgggtctcccgcgtc
gacgaggagacgttcgagcgggcgtaccgctacgtcgtccgcgaactgagcctcgagatc
gagccggccgacccggccgagtacctcccgcggttcgcctccgaactcggcgtcagcgac
gaggccgagcggcaggcgcgcgaactgctggagaccgcgaaggaggcgaacgtccactcg
ggcaagtcgcccgtggggctcgccgcggcggccatctacgccgccggcatcctcacgaac
gagaagctcacccagagcgaggtcagcgaggtgaccgacatgagcgaggtcaccatccgg
aaccggtaccaggagctgctggccgcccgcgaggacgcggtggggttcggcgccgggcgc
gccacggcgtaa
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