KEGG   Natronosalvus halobius: NGM15_02275
Entry
NGM15_02275       CDS       T08721                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
halv  Natronosalvus halobius
Brite
KEGG Orthology (KO) [BR:halv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:halv03400]
    NGM15_02275
Enzymes [BR:halv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NGM15_02275
    5.6.2.6  RNA 3'-5' helicase
     NGM15_02275
DNA repair and recombination proteins [BR:halv03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    NGM15_02275
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C WHD_Lhr ResIII AAA_25 HypA DUF7836 Cas3-like_C_2 Zn_ribbon_8 Zn_ribbon_PaaD
Other DBs
NCBI-ProteinID: USZ72160
LinkDB
Position
471030..473855
AA seq 941 aa
MTDGDVAAFTHLGSSVREALSERGFATPTAPQRLAIPPLAAGEHTLVIAPTGSGKTETAM
LPVFDDLVADPPDGFGALYVTPLRALNRDMRERLEWWGEYLGLEVDVRHGDTTQYQRGKQ
AENPPDVLVTTPETLQAMLTGERLREGLKDVSHVVIDEVHELAASKRGAQLSVGLERLRE
LSGSFQRIGLSATVGDPESVGQFLTGDRPCTIREIDVGSRIDVRVRQPEITDEDQRLAGE
LATDATTASHVRFIRDLVAENESTLIFVNTRQTAEALGSRFTRLDLPIGVHHGSLSKEAR
IDVEDRFKAGDLDALLCTSSMELGIDVGRIDHVIQYQSPRQVSRLLQRIGRAGHRRDQVS
RGTIVTTRPDDTLEALAIARRASAGEVEPAEIHDGSLDVVANQIPGIVQSTGSRHLTEFR
DLFARAYPFRDLEESALRSVLSELHRNRIVWFDESSERVETTGGTWQYVYANLSMIPDEA
TYEVHDIASSGQIGTLDERFVTTFGQPGAVFIQRGEMWRIVEIDDDEERVRVTPIEDPAG
EVPSWIGQEIPVPEPVAQEVGEIRGTVGSQLETGADDGAVARDLGGRYPGDDTTLLGAVS
GLRKQLEGEAPMPTHDRILLERQGRTVVLNACFGHRTNETLGRVLSALLGQQSGSSIGLD
TDPYRIELEVPTDVATSDIVAVLTETDPDHVGTIVELGLKGSDALAYRLSQVSAKFGALK
RWQGSGRMSNERLLKALEDTPMYAESIREVFHEDLDVTGASHVLSRLQSGELSLETVRGR
TAIGSAGRSGGKELLVPENADASVIQTVKERLQDDRVTLLCTHCREWYSRTKVKRVAEQP
ECPNCGSTRVAALSPWADDVLQAVQADSKDNEQEELTRRAVKNANLVQSHGKRAVVAMSA
RGVGPHNAAQIISRLRENEADFYRDILEKERQYARTKAFWD
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgacagacggggacgtcgccgccttcactcacctcggctcgagcgtccgggaggccctc
tccgaacgcgggttcgcgacgccgacggcgccacagcgactcgccatcccaccgctagcc
gccggcgagcacacgctcgtgatcgcgcccacggggagtggcaagaccgagacggcgatg
ctccccgtcttcgacgacctcgtcgccgacccgcccgacgggttcggcgcgctctacgtc
accccgctgcgggcgctcaaccgcgacatgcgcgagcgcctcgagtggtggggcgagtac
cttggactcgaggtggatgtccgtcacggcgacaccacgcagtaccagcgcggaaaacag
gccgagaatccgcccgacgtgctcgtgacgacccccgagacgctccaggcgatgctcacc
ggcgagcgcctccgggagggactcaaggacgtctcccacgtcgtgatcgacgaggttcac
gaactcgccgcctccaagcggggcgcccagttgtcggtgggactcgagcgactccgcgaa
ctctcgggttcgttccagcgcatcgggctctccgcgacggtcggtgaccccgagtcggtg
ggccagttcctcactggtgaccgaccgtgtacgattcgcgaaatcgacgtcgggagccgg
atcgacgtgcgggtgcgccagccggagatcacggacgaagaccagcgactcgcgggcgaa
ctcgccaccgatgccacgacggccagccacgtccgatttatcagggatctcgtcgccgaa
aacgagtccacgctcatcttcgtcaacacccgtcagacggccgaggcgctcggctcgcga
ttcacccgcctcgaccttcccatcggcgtccaccacgggtcgctctcgaaagaagcccgc
atcgacgtcgaggaccggttcaaagccggcgacctggacgccctgctatgtacctcttcg
atggaactcgggatcgacgtgggccgaatcgatcacgtaatccagtaccagagcccgcgc
caggtctcgcgactgctccagcggatcggccgcgcgggccaccgccgcgatcaggtctcg
cgggggaccatcgtcacgacccgcccggacgacacgctcgaggcgctggccatcgctcgc
cgggcgagcgccggggaggtcgaaccggccgagatccacgacgggagtctcgacgtggtc
gccaaccagataccggggatcgtccaatcgaccggctcgcgtcacctgacggagttccgc
gacctgttcgctcgcgcctatccgttccgggacctcgaggagtctgccctgcggagcgtc
ctctcggaactccaccggaatcgcatcgtctggttcgatgagagcagcgagcgagttgag
actaccggcggcacctggcagtacgtctacgccaacctctcgatgatccccgacgaggcg
acctacgaggtccacgacatcgcctcgagcggccagatcggcaccctcgacgagcgattc
gtcacgaccttcggtcagccgggagccgtcttcatccagcgcggagagatgtggcgaatc
gtcgagatcgacgacgacgaagagcgggtacgggtcacgcccatcgaagatccagcaggt
gaggtcccgtcctggatcggccaggagatacccgttcccgaaccggtcgcccaggaggtg
ggcgagattcgcggtaccgtcggctcgcaactcgagaccggcgccgacgacggcgccgtc
gctcgcgacctcggcggacgctatccgggcgacgatacgacgctcctgggggccgtctct
gggctccgaaaacagctcgagggcgaggcgccgatgccgacccacgaccgcatcctgctc
gagcgccagggacggacggtcgttctcaacgcctgtttcggccaccggacgaacgagact
ctcggtcgggtgctctcggccctgctcggccagcagtccgggtcgtcgatcgggctcgac
actgacccctaccggatcgaactcgaggtaccgaccgacgtggcgacgagcgacatcgtg
gccgtcctgaccgaaacggaccccgaccacgtcggcaccatcgtcgagctgggattgaag
gggtcggacgccctcgcctatcgcctctcgcaggtctcggcgaagttcggcgcgctcaag
cgctggcagggctccggccgcatgtcgaacgagcgattactcaaagcgctcgaggacacg
ccgatgtacgccgagtcgatccgtgaggtgttccacgaggatctcgacgtgactggtgcg
agccacgtcctctcgcgactccagtcgggcgaactctcgctcgagacggttcgcggccga
acggctatcgggagcgcgggccgctccggtggcaaggaactgctagtgcccgagaacgcc
gacgcgagcgtcatccagaccgtcaaggagcgcctccaggacgaccgggtgaccctgctg
tgtacccactgtcgggagtggtactcgcgaacgaaagtgaagcgggtcgcggagcaacct
gagtgtccgaattgcggttcgacgcgcgtggcggcgctgagtccgtgggccgacgacgtc
ctccaggccgtccaggccgactcgaaggacaacgagcaagaggagctgacccgtcgtgca
gttaaaaatgcgaacctcgtccagagtcacggcaagcgggccgtcgtcgccatgtccgcc
cgcggcgtcggcccgcacaacgccgcccagatcatcagtcgcctgcgcgagaacgaggcc
gacttctaccgggacatcctcgagaaggagcgccagtacgcccggacgaaggccttctgg
gactga

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