KEGG   Natronosalvus halobius: NGM15_04580
Entry
NGM15_04580       CDS       T08721                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
halv  Natronosalvus halobius
Pathway
halv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:halv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NGM15_04580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:halv03019]
    NGM15_04580
Messenger RNA biogenesis [BR:halv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     NGM15_04580
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B_2 Lactamase_B RMMBL
Other DBs
NCBI-ProteinID: USZ72596
LinkDB
Position
956510..957859
AA seq 449 aa
MEIEIATIGGYEEVGRQMTAVRAGNDVVIFDMGLNLSQVLIHDNVETERMHSLDLIDMGA
IPDDRIMSDLEGDVQAIVPTHGHLDHIGAISKLAHRYDAPVVATPFTIELVKQQVESEQK
FGVENDLVKMDPGESMTIGDHGCELEFVNVTHSIIDAINPVLHTPEGAIVYGLDKRMDHT
PVIGDPIDMKRFREIGREGEGVLCYIEDCTNANKKGRTPSENVAREHLRDVLYSIEDYDG
GIVATTFSSHIARVKSLVEFADDIGRQPVLLGRSMEKYSGTAERLDFIDFPSDLGMFGHR
KSVDRTFKRIMNEGKENFLPVVTGHQGEPRAMLTRMARGETPYELDNGDKVVFSARVIPE
PTNEGQRYQAEKLLGMQGARIYDDIHVSGHLNQEGHYAMLDALQPQHIVPAHQDLKGLSG
YVKLCEGEGYHMGRDVHVSRNGNLIQLVD
NT seq 1350 nt   +upstreamnt  +downstreamnt
atggaaatcgaaattgcaaccatcggcggctacgaagaagttggacggcagatgactgcc
gttcgcgcaggaaacgacgtcgtcatcttcgacatgggtctgaacctctcacaggttctc
atccacgacaacgtcgagaccgaacgcatgcacagcctcgatctgatcgacatgggcgcc
atccccgacgatcggatcatgagcgacctcgagggcgacgtccaggcaatcgtcccgacc
cacggtcacctcgaccacatcggcgcgatctcgaaactcgcccaccgctacgacgccccc
gtcgtcgcgacgccgttcacgatcgaactggtcaaacagcaggtcgagagcgaacagaag
ttcggcgtcgagaacgacctggtcaagatggacccgggcgagtcgatgaccatcggcgac
cacgggtgtgaactcgagttcgtcaacgtcacccactcgatcatcgacgcgatcaacccc
gtgctccacacgcccgagggcgccatcgtctacggcctggacaagcgcatggaccacacg
ccggtcatcggcgaccccatcgacatgaagcgcttccgcgagatcggtcgggagggcgag
ggcgtgctctgttacatcgaggactgcaccaacgccaacaagaagggccgaacgccctcc
gagaacgtcgcccgcgagcacctccgcgacgtcctctacagcatcgaagactacgacggc
ggcatcgtcgccaccaccttctcttcacacatcgctcgcgtgaagagcctcgtcgagttc
gccgacgacatcggccgccagcccgtcctgctcggacgctcgatggagaagtactccggc
accgccgagcgactcgacttcatcgacttcccgtcggacctcggaatgttcggccaccga
aagtccgtcgaccggacgttcaagcggatcatgaacgagggcaaggagaacttcctgccc
gtcgtcaccggccaccagggcgaaccccgtgcgatgctcacccgaatggcccgcggcgag
accccctacgaactggacaacggcgacaaagtcgtcttctccgcgcgcgtcatccccgaa
ccgaccaacgagggccagcgctaccaggccgagaaactgctcggcatgcagggcgcgcga
atctacgacgacatccacgtttccggccacctcaaccaggagggccactacgcgatgctc
gacgcgcttcagccccagcacatcgttcccgcccaccaggatctcaaagggctttccggc
tacgtcaaactctgtgaaggcgaggggtaccacatgggccgtgacgtccacgtctcgcga
aacggcaacctgatccagcttgtcgactga

DBGET integrated database retrieval system