Natronosalvus halobius: NGM15_04580
Help
Entry
NGM15_04580 CDS
T08721
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
halv
Natronosalvus halobius
Pathway
halv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
halv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NGM15_04580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halv03019
]
NGM15_04580
Messenger RNA biogenesis [BR:
halv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NGM15_04580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
RMMBL
Motif
Other DBs
NCBI-ProteinID:
USZ72596
LinkDB
All DBs
Position
956510..957859
Genome browser
AA seq
449 aa
AA seq
DB search
MEIEIATIGGYEEVGRQMTAVRAGNDVVIFDMGLNLSQVLIHDNVETERMHSLDLIDMGA
IPDDRIMSDLEGDVQAIVPTHGHLDHIGAISKLAHRYDAPVVATPFTIELVKQQVESEQK
FGVENDLVKMDPGESMTIGDHGCELEFVNVTHSIIDAINPVLHTPEGAIVYGLDKRMDHT
PVIGDPIDMKRFREIGREGEGVLCYIEDCTNANKKGRTPSENVAREHLRDVLYSIEDYDG
GIVATTFSSHIARVKSLVEFADDIGRQPVLLGRSMEKYSGTAERLDFIDFPSDLGMFGHR
KSVDRTFKRIMNEGKENFLPVVTGHQGEPRAMLTRMARGETPYELDNGDKVVFSARVIPE
PTNEGQRYQAEKLLGMQGARIYDDIHVSGHLNQEGHYAMLDALQPQHIVPAHQDLKGLSG
YVKLCEGEGYHMGRDVHVSRNGNLIQLVD
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgaaattgcaaccatcggcggctacgaagaagttggacggcagatgactgcc
gttcgcgcaggaaacgacgtcgtcatcttcgacatgggtctgaacctctcacaggttctc
atccacgacaacgtcgagaccgaacgcatgcacagcctcgatctgatcgacatgggcgcc
atccccgacgatcggatcatgagcgacctcgagggcgacgtccaggcaatcgtcccgacc
cacggtcacctcgaccacatcggcgcgatctcgaaactcgcccaccgctacgacgccccc
gtcgtcgcgacgccgttcacgatcgaactggtcaaacagcaggtcgagagcgaacagaag
ttcggcgtcgagaacgacctggtcaagatggacccgggcgagtcgatgaccatcggcgac
cacgggtgtgaactcgagttcgtcaacgtcacccactcgatcatcgacgcgatcaacccc
gtgctccacacgcccgagggcgccatcgtctacggcctggacaagcgcatggaccacacg
ccggtcatcggcgaccccatcgacatgaagcgcttccgcgagatcggtcgggagggcgag
ggcgtgctctgttacatcgaggactgcaccaacgccaacaagaagggccgaacgccctcc
gagaacgtcgcccgcgagcacctccgcgacgtcctctacagcatcgaagactacgacggc
ggcatcgtcgccaccaccttctcttcacacatcgctcgcgtgaagagcctcgtcgagttc
gccgacgacatcggccgccagcccgtcctgctcggacgctcgatggagaagtactccggc
accgccgagcgactcgacttcatcgacttcccgtcggacctcggaatgttcggccaccga
aagtccgtcgaccggacgttcaagcggatcatgaacgagggcaaggagaacttcctgccc
gtcgtcaccggccaccagggcgaaccccgtgcgatgctcacccgaatggcccgcggcgag
accccctacgaactggacaacggcgacaaagtcgtcttctccgcgcgcgtcatccccgaa
ccgaccaacgagggccagcgctaccaggccgagaaactgctcggcatgcagggcgcgcga
atctacgacgacatccacgtttccggccacctcaaccaggagggccactacgcgatgctc
gacgcgcttcagccccagcacatcgttcccgcccaccaggatctcaaagggctttccggc
tacgtcaaactctgtgaaggcgaggggtaccacatgggccgtgacgtccacgtctcgcga
aacggcaacctgatccagcttgtcgactga
DBGET
integrated database retrieval system