Natronosalvus halobius: NGM15_04705
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Entry
NGM15_04705 CDS
T08721
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
halv
Natronosalvus halobius
Pathway
halv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
halv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
NGM15_04705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halv03019
]
NGM15_04705
03009 Ribosome biogenesis [BR:
halv03009
]
NGM15_04705
04131 Membrane trafficking [BR:
halv04131
]
NGM15_04705
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
halv04147
]
NGM15_04705
Messenger RNA biogenesis [BR:
halv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
NGM15_04705
Ribosome biogenesis [BR:
halv03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
NGM15_04705
Membrane trafficking [BR:
halv04131
]
SNARE
SNARE associated proteins
Others
NGM15_04705
Autophagy
Aggrephagy
Other aggrephagy associated proteins
NGM15_04705
Exosome [BR:
halv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NGM15_04705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
AAA_16
RuvB_N
CDC48_2
AAA_5
AAA_22
TIP49
AAA_2
AAA_33
AAA_14
NPHP3_N
nSTAND3
RNA_helicase
IstB_IS21
AAA_28
Mg_chelatase
AAA_7
AAA_17
AAA_18
AAA_lid_PRS2_C
DUF815
ABC_tran
Sigma54_activat
AAA_3
ATPase
NB-ARC
Parvo_NS1
Vps4_C
AAA_24
AAA_30
TsaE
AAA_11
PhoH
SLFN-g3_helicase
NACHT
KAP_NTPase
IPT
Motif
Other DBs
NCBI-ProteinID:
USZ72621
LinkDB
All DBs
Position
981621..983852
Genome browser
AA seq
743 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGSETTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKAEATKANTLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVGHDIVPVMSSTNHPFMRSPGQAIPLIAVETDPEGVVLITEDTDVELREEPISGFE
KTGGGITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEV
GREEILQIHTRGMPLSDDVNLSHLADETHGFVGADIESLTKESAMKALRRYLPEIDLDEE
DIPPSLIDRMIVKREDFRGALAEVEPSAMREVLVELPKVSWDDVGGLDEAKDQVKESVEW
PLREPQKFERMGIDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTVIFFDELDSLAPGRGGEVGSNVSERVVNQLLTELDGLEEMEDV
MVIGATNRPDMIDPALLRSGRFDRLVMLGEPNTEGRERILEIHTDDTPLAADVSLREIAE
ITEGYVGSDLESIGREAAIEALREDDDADLVEMRHFRKAMENVRPTINEDILEYYDQIEQ
QFKGGGNRVEPGTGRRGSRIGFQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtgcaactggaggtcgcgaaagcgtacccgaacgactcgggccgcggcatc
gcccgtctcgacccggacaccttgcttcacctgaagctgagtccgggcgacatcatcgag
atcgaagggtcggagacgaccgctgcaaaggtctggcgtgcggaccgacaggactggaac
acggacaccgtccgcatcgacgggttcacccgccagaacgccgacgtcggcatcggcgag
cgcgtcacgattcggaaggccgaggcgacgaaggcgaacacgctggtgctcgctcccccg
gaggaggcctccgtccagttcggctccgacgccgccggcatggtgaaacgccagatcctc
aagcggccagtcgtcggccacgacatcgtccccgtgatgagttcgacgaaccacccgttc
atgcgctcgccgggccaggcaatcccgctgatcgccgtcgaaaccgatcccgagggcgtc
gtcctcatcaccgaggataccgacgtcgaacttcgcgaggagcccatctcgggcttcgag
aagaccggcggcgggatcacctacgaggacatcggtggcctccagaacgagatccagcgc
gtccgcgagatggtcgaactgccgatgaaacacccccagatcttcaagaagctgggaatc
gagcccccgcaaggggtgctcctgcacggcccgccggggacgggcaagacgctgctcgcg
aaggccgtcgccaacgagacctctgccagtttcttctccatcgccggccccgagatcatc
tcgaagtactacggcgagtccgaacaacagctccgcgaaattttcgaagacgccagcgag
gagtctcccgcgatcatcttcatcgacgaactcgactccatcgcccccaagcgcgaggac
gtcaccggcgaggtcgaacgccgcgtcgtcgcccagttgctgaccatgatggacggcctc
gaggctcgcggccaggtgatcgtcatcgccgcgaccaaccgcgtcgacagcgtcgacccc
gccctccgccggcccggccggttcgaccgcgagatcgagatcggcgtcccggacgaggtc
ggccgtgaggagattctgcagatccacacccggggtatgccgctctccgacgacgtcaac
ctctcgcacctggccgacgagacccacggcttcgtcggcgcggacatcgagagtctgacc
aaagaatccgcgatgaaggccctgcggcggtacctcccggagatcgacctggacgaggag
gacatcccgccgagcctgatcgaccggatgatcgtcaagcgcgaggacttccgcggcgct
ctcgccgaggtcgaaccgtcggcgatgcgggaagtcctcgtcgagttgccgaaggttagc
tgggacgacgtcggcgggctcgacgaggcgaaagatcaggtcaaggagtccgtcgagtgg
cccctgcgcgagccccagaagttcgagcggatgggcatcgacccacccgcgggcgtcttg
ctgtacggcccgccgggcaccggaaagacgctcatggcaaaggccgtcgccaacgagacc
aacgccaacttcatctcggttcgcggcccacagttgctcagcaagtgggtcggcgagtcc
gagaaagccatccgtcagaccttccggaaggcccggcaggtctccccaacggtgatcttc
ttcgacgaactcgactcgctcgcccccggccgcggcggcgaggtcgggtcgaacgtctcc
gaacgcgtcgtcaaccagctactgaccgaactcgacggcctcgaggagatggaggacgtg
atggtgatcggtgcgacgaaccgcccggacatgatcgacccggccctcctccggtcgggc
cgcttcgaccggctggtcatgctcggcgaaccaaacactgagggtcgcgaacgaatcctc
gaaatccacaccgacgacacgcccctggccgcggacgtcagcttgcgcgagatcgccgag
atcacggaggggtacgtgggcagcgacctcgagtcgatcggccgggaggcagcgatcgag
gcgctccgcgaggacgacgacgccgatctcgtcgagatgcgccacttccggaaagcgatg
gaaaacgtgcgcccgacgatcaacgaggacatcctcgagtactacgatcagatcgaacag
cagttcaagggcggtggaaacagggtcgaacccggcacgggtcgccggggaagtcgtatc
gggttccagtaa
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