Natronosalvus halobius: NGM15_06680
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Entry
NGM15_06680 CDS
T08721
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
halv
Natronosalvus halobius
Brite
KEGG Orthology (KO) [BR:
halv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halv03016
]
NGM15_06680 (truD)
Enzymes [BR:
halv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
NGM15_06680 (truD)
Transfer RNA biogenesis [BR:
halv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NGM15_06680 (truD)
Prokaryotic type
NGM15_06680 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
USZ72983
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All DBs
Position
1386187..1387608
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AA seq
473 aa
AA seq
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MRQAHPIEQAVGIEHYVSETDGVGGHLRDRDEHFRVRELERFATEPVDASTDAYPHLIFR
ATLRGWDTNDFARRLSNELGVSRERVSWAGTKDKRAITTQLFSVYGADPADLPDLNRAEI
DVLGRAGRSLEFGDLAGNAFELVVSDPGEGALEQAEAITDELAAFAGLEGGSVVESGGEE
RPTTIGVPNVFGQQRFGSKRPITHEVGLEIVRGDWEGAVMAYLGRPTDAEPEDTQTARAF
VEETRDWQEALERFPNRLQYERSMLHELAESRDDGSGEGESGDGDGSENPSPETFRNALE
RLPSNLQRLFVHAAQSFVFNRILSERLAAGLPFDRPVAGDVVCFADRDAPEGLELPNVDR
SQRVDERRVRSVTRHCERGRAFVTAPLVGTETTLADGEPGEIERRVLAEQDLEPSDFELP
GEFNSTGTRRAILVRTPFAVDADPLTFSFSLPKGSYATVVMREYLKSDPLALG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaggcccaccccatagagcaggccgtcggcatcgagcactacgtctccgagacc
gacggcgtcggcggtcacctccgcgaccgcgacgagcacttccgcgtccgtgaactcgag
cgcttcgccacggagccggtcgacgcctcgaccgacgcctacccgcacctgatcttccgg
gcgacgctccgtggctgggacacgaacgacttcgcgcgccggctctcgaacgaactcggc
gtctcccgcgagcgggtgtcctgggcaggaacgaaggacaagcgggcgatcacgacgcaa
ctgttctcggtctacggcgccgaccccgctgacctccccgatctcaaccgcgccgaaatc
gacgtgctgggccgggctggtcgctccctcgagttcggcgacctggcgggcaacgcgttc
gagctggtcgtgagcgaccccggcgaaggcgcgctcgagcaggccgaggcgatcacggac
gagttggcggcgtttgccgggctcgagggcgggagcgtggtcgagagcggtggcgaggag
cgaccgacgaccatcggcgtccccaacgtcttcggccagcaacgcttcggcagcaagcgc
ccgatcacccacgaggtcggcctcgagatcgttcgcggcgactgggagggtgccgtcatg
gcctaccttggccggccgaccgacgcggaacccgaagacacacagaccgcgcgggcgttc
gtcgaggagactcgcgactggcaggaagctctcgagcgctttccgaatcggctccagtac
gagcgctcgatgctccacgaactcgccgagagtcgcgatgacgggagcggggagggcgag
agcggagacggcgacggcagcgagaacccgtcccccgagacgttccgaaacgccctcgag
cggctcccctcgaacctccagcggctgttcgtccacgccgctcagtcgttcgtcttcaac
cgcattctgagcgagcgcctcgcggccggcctcccgttcgaccgcccagtcgccggcgac
gtcgtctgcttcgccgaccgcgacgcccctgagggtctcgagttgcccaacgtcgaccga
agccagcgcgtcgacgagcgccgggtgcggtcggtgacccgccactgcgagcgtggccgg
gcgttcgttaccgcgccgctggtcggcacggagacgacgctggccgacggcgaaccgggc
gaaatcgaacgtcgagtcctggcggaacaggacctcgaaccgtcggacttcgagttgccc
ggcgaattcaactcgactggaaccagacgagcgatcctcgttcggacgccgttcgccgtc
gacgcggatccgctgacgttctcgttctcgctgccgaagggctcgtacgcgacggtcgtg
atgcgcgagtacctcaagagcgacccgctcgcgctcggatga
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