Natronosalvus halobius: NGM15_07120
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Entry
NGM15_07120 CDS
T08721
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
halv
Natronosalvus halobius
Pathway
halv03420
Nucleotide excision repair
halv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
halv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NGM15_07120
03430 Mismatch repair
NGM15_07120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halv03400
]
NGM15_07120
Enzymes [BR:
halv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NGM15_07120
DNA repair and recombination proteins [BR:
halv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NGM15_07120
MMR (mismatch excision repair)
Other MMR factors
NGM15_07120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
Herpes_ori_bp
AAA_22
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
USZ73067
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All DBs
Position
1465119..1467047
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AA seq
642 aa
AA seq
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MATTETDADAEAGAHVTRLFGGPGSGKTTALLDHVEEILEADDVTFRDILVVSYTRAAAQ
EIRERLAERLDESPRALQGNVCTMHAKAYNLLDLSRGDVIGEKDKEEFCEDYGLEYEDEY
SGAGRRTARSTTIGNKIIATSQWLQRTRRDVADWYDVPFQWDVEEVRLPPEIDPNAQEGN
KYTPTWPSDDDRIDVPEAIRAWRNYKGQEGKIGFADMLERVKQRSLIPNVDYLVIDEFQD
ITTLQYDVYEEWKPHVERVLIAGDDDQVVYSWQGADPALLLDEEVDEDVILPNSYRLPSN
VLNAVNQEIRHIDVRQDKDLNPRKEGGLVEAYQNRSMLDLVRMVRQTLVEDDGTIMLLFR
ARYQMFQFIDEFITEGIPFTALTDQRMWTDRLTQYVRAIEAIDADEDVTGLQARRLADML
MDSAFGTNERDALFDEIDERQEDAGIDDLEELMIPVDVIRDYAPFLPDPASASDMVRKVT
NFQKKSIKAYFAIGTYEGMATDQVRVGTIHSAKGREADHVFVGTDLTEKVVEQMVATVDD
PEDIPGVEEFTKTSSPVPVLTDNERRVFYVGMSRARERLVLLENLVDGAPTLSIDVLLNN
RQTGADLEELVEQAQLSEDERLDGEGDADADIDADEAEIEAP
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggctacaacggagacggatgcggatgctgaggcgggggcgcacgtcactcgtctgttc
ggcggccccggcagcgggaaaacgacggcactcctcgaccacgtcgaagagattctcgaa
gcagacgacgtgacgtttcgagacatcctcgtcgtctcctacacgcgagcggccgcccag
gagattcgagaacggctggccgagcgcctcgacgagagcccacgcgccctccagggcaac
gtctgtacgatgcacgccaaggcgtacaacctgctcgacctctctcgcggcgacgtcatc
ggcgagaaggacaaagaggagttctgcgaagactacggcctcgagtacgaggacgagtac
agcggcgcaggacggcgtaccgcacggtcgacgactatcgggaacaagatcatcgcgacg
agtcagtggctccagcgcacccgccgggacgtcgccgactggtacgacgtacccttccag
tgggacgtcgaggaggtccgactcccgcccgaaatcgacccgaacgcccaagaggggaac
aagtacacgccgacgtggccctccgacgacgaccggatcgacgtccccgaggcgattcgc
gcctggcgtaactacaagggacaggaaggtaagatcggcttcgcggacatgctcgagcgg
gtgaaacagcgctcgctcatcccgaacgtcgactacctggtcatcgacgagttccaggac
atcacgaccctgcagtacgacgtctacgaagagtggaaaccccacgtcgagcgagtcctg
atcgccggcgacgacgaccaggtcgtctactcctggcagggggccgaccccgcactcttg
ctcgacgaggaggtcgacgaggacgtcatcctcccgaactcctaccggctgccctcgaac
gttctcaacgcagtcaaccaggagattcgccacatcgatgttcgccaggacaaggacctc
aacccgcgcaaggagggtggcctcgtcgaggcctaccagaaccgatcgatgctcgacctg
gttcggatggtccgccaaacgctggtcgaggacgacggaacgatcatgctactcttccgg
gcacgctaccagatgttccagttcatcgacgagttcatcaccgaggggatccccttcacc
gcgctgaccgaccaacggatgtggaccgatcgactgacgcagtacgtccgcgctatcgag
gccatcgacgcggacgaagacgtcaccggcttacaggcccggcgcctcgccgacatgctc
atggactcggcgttcggaaccaacgaacgcgacgctctcttcgacgagatcgacgagcgt
caggaggacgccggtatcgacgacctcgaggaactgatgatcccggtggacgtgatcagg
gactacgcgccgttcctccctgacccggcctcggcctcggacatggtccggaaggtgacg
aacttccagaagaagtcgatcaaggcctacttcgccatcggcacctacgagggaatggcc
acggaccaggttcgtgtcggcacgattcactccgcgaagggtcgcgaggccgaccacgtc
ttcgtcggcaccgacctcaccgagaaagtggtcgagcagatggtcgccacggtcgacgac
cccgaggacatccccggcgtcgaggagttcaccaagaccagctcgcccgtacccgtcctg
acggacaacgagcgtcgcgtcttctacgtcggtatgtcccgcgcccgggaacgcctcgtc
ctcctcgagaacctcgtcgacggcgcgccgacgctctcgatcgacgtcttgctcaacaac
cgccagaccggcgccgacctcgaggaactcgtcgagcaggcccagctgtccgaggacgag
cgactcgatggcgagggtgacgccgatgccgacatcgacgccgacgaagccgaaatcgaa
gcgccgtga
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