Natronosalvus halobius: NGM15_08380
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Entry
NGM15_08380 CDS
T08721
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halv
Natronosalvus halobius
Pathway
halv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NGM15_08380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halv03021
]
NGM15_08380
Transcription machinery [BR:
halv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NGM15_08380
Prokaryotic type
Archaeal type
TFB
NGM15_08380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Ribosomal_S27e
Cyclin_N
Zn_ribbon_Elf1
Lar_restr_allev
zf-C2HC_3
FtrD-like
DUF5817
Motif
Other DBs
NCBI-ProteinID:
USZ73299
LinkDB
All DBs
Position
complement(1707890..1708858)
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AA seq
322 aa
AA seq
DB search
MIRPTREREQSATSATKETDSTQSTVKQCPECESESLVTSDGGSEISCERCGLIVEESRI
DRGPEWRAFNAAERDSKSRVGAPTTQTMHDKGLTTAIDWKDKDAYGRSLSSEKRSQMHRL
RKWQERIRTKDAGERNLQFALSEIDRMSSALGIPRSVREVACMLYRRALQEDLIRGRSIE
GVATSALYAACRIEGIPRSLEEVAAVSRVDRKEIGRTYRYVAQELGLGMEPVDPKKYVPR
FCSELELSEEVQAKANEIIDVTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVANV
AQVTEVTIRNRYQEQIEAVGLY
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgatacgccccacccgcgaacgagagcaatccgcgacgtcggctacgaaagaaacggac
tcgactcagtcgacggtgaaacagtgtccggagtgtgagtccgagtcgctggtcacgagc
gatggggggagcgaaatcagttgcgagcggtgtgggctgatcgtcgaagaatcccgtatc
gaccgcgggccggagtggcgggcgttcaacgcagccgagcgcgacagcaaatcgcgcgtc
ggtgcgccgacgacccagacgatgcacgacaaggggctcacgacggccatcgactggaag
gacaaggacgcctacggccgctcgctctcctcggaaaagcgcagtcagatgcaccgcctg
cgcaagtggcaagagcgcatccgaaccaaggacgcgggcgagcgcaacctccagttcgcc
ctctccgaaatcgaccggatgtcctcggcactcggcattccacggtccgtccgcgaggtc
gcctgcatgctctatcgccgggcgctccaggaggacctcatccgcgggcgttcgatcgag
ggcgtcgccacctcggcgctgtacgccgcctgccgaatcgagggcattccgcggagcctc
gaggaagtcgccgccgtctcgcgggtcgatcgcaaggagatcggccgaacctaccgctac
gtggctcaggaactcggtctgggcatggagccggtcgacccgaagaagtacgtcccccgg
ttctgttcggaactcgagctctccgaggaggtccaggcgaaggccaacgagatcatcgac
gtgacggccgagaaggggctcctctccgggaaatccccgacgggttacgctgccgcggcc
atctacgcggcctcgctgctctgtaacgagaagaagacccagcgggaggtcgccaacgtc
gcccaggtgaccgaggtgacgatccgcaaccggtaccaggagcagatcgaggcagtcggg
ttgtactga
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