Natronosalvus halobius: NGM15_09370
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Entry
NGM15_09370 CDS
T08721
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
halv
Natronosalvus halobius
Pathway
halv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NGM15_09370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halv03021
]
NGM15_09370
Transcription machinery [BR:
halv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
NGM15_09370
Prokaryotic type
Archaeal type
TFE
NGM15_09370
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Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
DUF7129
Zn_ribbon_3
DNA_ligase_ZBD
Sigma70_r3
Zn_ribbon_6
Zn_ribbon_8
NRDD
Motif
Other DBs
NCBI-ProteinID:
USZ70332
LinkDB
All DBs
Position
1902807..1903331
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AA seq
174 aa
AA seq
DB search
MAFEDLLEDPVIQKYLHELVGPKGMPVAAAPPDGEVTDEELAETLDLELNDVRRALFILY
ENDLATYRRLRDEDSGWLTYLWTFEYDNIPENLEEELYRLYDALLDRREYEQNHEFYLCE
ICSIRFEFGEAMDFGFECPECGSPVESMDNSRLVRAMDDRLDALENELNVESTA
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggacctgctcgaggacccggttatccagaagtacttacacgagctcgtc
ggtcccaaggggatgcccgtcgcggcggcgccgccggacggggaggtgaccgacgaggaa
ctcgccgagacgctggacctcgaactgaacgacgtgcggcgggcgctgttcatcctgtac
gagaacgacctcgccacctatcgccgcctccgcgacgaggattccggctggctcacctac
ctctggacgttcgagtacgacaatatcccggagaacctcgaggaggagctctaccggctc
tacgacgccctcctcgaccgtcgggagtacgagcagaaccacgagttctacctctgtgag
atctgttcgatccgcttcgaattcggcgaggcgatggacttcggcttcgagtgccccgag
tgtggctcgcccgtcgaatcgatggacaacagccggctcgtccgcgcgatggacgaccgc
ctcgacgccctcgagaacgaactcaacgtcgaatccaccgcctga
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