KEGG   Natronosalvus halobius: NGM15_09775
Entry
NGM15_09775       CDS       T08721                                 
Name
(GenBank) DNA-directed RNA polymerase, subunit E''
  KO
K15171  transcription elongation factor SPT4
Organism
halv  Natronosalvus halobius
Pathway
halv03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:halv00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    NGM15_09775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:halv03021]
    NGM15_09775
   03019 Messenger RNA biogenesis [BR:halv03019]
    NGM15_09775
Transcription machinery [BR:halv03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     NGM15_09775
  RNA polymerase I system
     NGM15_09775
Messenger RNA biogenesis [BR:halv03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     NGM15_09775
SSDB
Motif
Pfam: Spt4 Zn_ribbon_RanBP Zn_Ribbon_1 DZR Ribosomal_L40e
Other DBs
NCBI-ProteinID: USZ70408
LinkDB
Position
1981238..1981435
AA seq 65 aa
MASNRLVCRECHLVNPADATTCESCASSSLTEDWAGYVVIAHPEQSEIATEMQVTEPGSY
ALKVR
NT seq 198 nt   +upstreamnt  +downstreamnt
gtggcgtcgaaccgcctcgtctgtcgcgagtgccacctcgtcaatccggccgacgccacc
acctgtgagtcctgtgcctcctcctcgctcaccgaagactgggccggctacgtcgtcatc
gcccaccccgaacagagcgagattgcgacggagatgcaggtcaccgaaccgggctcgtac
gccctcaaggttcggtag

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