Natronosalvus halobius: NGM15_11425
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Entry
NGM15_11425 CDS
T08721
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
halv
Natronosalvus halobius
Pathway
halv03030
DNA replication
halv03420
Nucleotide excision repair
halv03430
Mismatch repair
halv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
halv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NGM15_11425
03420 Nucleotide excision repair
NGM15_11425
03430 Mismatch repair
NGM15_11425
03440 Homologous recombination
NGM15_11425
03460 Fanconi anemia pathway
NGM15_11425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halv03000
]
NGM15_11425
03032 DNA replication proteins [BR:
halv03032
]
NGM15_11425
03400 DNA repair and recombination proteins [BR:
halv03400
]
NGM15_11425
Transcription factors [BR:
halv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
NGM15_11425
DNA replication proteins [BR:
halv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
NGM15_11425
DNA repair and recombination proteins [BR:
halv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
NGM15_11425
MMR (mismatch excision repair)
NGM15_11425
DSBR (double strand breaks repair)
HR (homologous recombination)
NGM15_11425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
OB_Ssb-like
OB_MEIOB_N
PepSY_2
Motif
Other DBs
NCBI-ProteinID:
USZ70713
LinkDB
All DBs
Position
2323164..2324669
Genome browser
AA seq
501 aa
AA seq
DB search
MSEIEGIYEDLEADVSLEEFQEAVEAKVEQMGGLADEETAAMLIAHELGESEVTGVADIE
PGMEEAKFTAKVVKIGDIRTFERDGEDEDGRVVNVEVADETGSVRAAFWDEHAQAAVDEL
EEGQVLKIKGRPKEGFSGVEVSVDDVEQDDDTEIDVQISDTYTVEALSLGLSDVNLVGVV
LDTDTVRTFDRDDGSEGKVANLTLGDSTGRVRVTLWDERADLANEFAPGDTVEVVDGYVR
DRDGSLELHVGNRGAVEEVDVDVEYVPESTPIESLEIGDTVDIAGVVRSADPKRTFDRDD
GSEGQVRNIRVQDATGDIRVAMWSEKADVDVGPGDEVALADVEIKDGWQDDLEASAGWRS
TVTVLGEGDGGGASADSSDGGSESTGLSAFANGDAGGANAAEDGRDGDTGETGDTNDTDG
AADTANASGANDANDPEDANDPEDGQQIEFTGVVVQAGDPVVLDDGETTMSVETTVDVGL
GEEITARGQVNDGRLEADEVF
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagatcgagggtatctacgaagacctcgaggccgacgtctccctcgaggagttc
caggaggccgtcgaggccaaagtcgagcagatgggtggactcgccgacgaggaaacggcg
gcgatgctcatcgcacacgaactcggcgagagcgaggtcaccggcgtcgcggacatcgaa
ccggggatggaggaggcgaagttcaccgccaaggtcgtgaaaatcggcgacatccgcacg
ttcgaacgcgacggcgaggacgaggacgggcgcgtcgtcaacgtcgaagtcgccgacgag
accgggagcgtccgggctgcgttctgggacgaacacgcccaggcggccgtcgacgaactc
gaggaggggcaggtgctgaagatcaagggccgcccgaaggaggggttcagcggcgtcgaa
gtgagcgtcgacgacgtcgagcaggacgacgacaccgaaatcgacgtccagatctccgac
acctacaccgtcgaggcgctctcgctcggcctctcggacgtgaacctcgtcggcgtcgtc
ctggacaccgacaccgtccgaacgttcgaccgggacgacggctcggagggaaaagtggcc
aacctcacgctcggcgactcgaccggacgcgtccgggtcaccctctgggacgagcgagcc
gatctcgccaacgagttcgcccccggcgacaccgtcgaggtcgtcgacggctacgtgcgc
gaccgcgacggctcgctcgaactccacgtcggcaaccgcggcgccgtcgaggaagtcgac
gtggacgtcgagtacgtccccgagagcacgccgatcgaatccctcgaaatcggggatacg
gtcgacatcgcgggcgtcgtccgctcggcggacccgaagcggacgttcgacagggacgac
ggctcggaggggcaggttcgaaacatccgcgtccaggacgcgacgggcgacattcgcgtc
gccatgtggagtgagaaggccgatgtcgacgtcggtcccggcgacgaggttgcgctggcg
gacgtggagatcaaggacggctggcaggacgacctcgaggcctccgccgggtggcgctcg
actgtgacggtgctcggcgagggcgatggcggtggtgccagcgccgattcgagcgacggt
gggagcgagtcgaccgggctttcagcgttcgcgaacggcgatgccggcggggcgaacgcg
gccgaagacggcagagatggtgatacaggtgaaacaggcgatacaaacgatacagacggt
gctgccgataccgccaatgccagcggtgccaacgacgccaacgaccccgaagacgccaac
gaccccgaagacggccaacagatcgaattcaccggcgtcgtcgtccaggccggcgatccg
gtcgtcctcgacgacggcgagacgacgatgagcgtcgagacgaccgtcgacgtcggtctc
ggggaagaaataacggctcgcggacaggtcaacgacgggcgactcgaggccgacgaggtc
ttctga
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integrated database retrieval system
