Natronosalvus halobius: NGM15_12770
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Entry
NGM15_12770 CDS
T08721
Name
(GenBank) DEAD/DEAH box helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
halv
Natronosalvus halobius
Brite
KEGG Orthology (KO) [BR:
halv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halv03019
]
NGM15_12770
Messenger RNA biogenesis [BR:
halv03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
NGM15_12770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
YyzF
DEXQc_Suv3
NosR
Motif
Other DBs
NCBI-ProteinID:
USZ70958
LinkDB
All DBs
Position
2617109..2619169
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AA seq
686 aa
AA seq
DB search
MSKQVPEVETLFCHETGNDYLVVVTRDGKRLFRAKLGVSETSAGPRPAKFRVKRNSSEEP
RQPDEFVDLARRAGRIRISEQTSPEGRRELEDMFEGYQLEEKTKVVRTCRYCASSGRYSP
ITTETAIKDDEDWICTDCAARELERELSYVGNVTGAAKDRLEDLMLEVQDLQRITNLLKG
RLDPDLTKFDTISATTDEVDQVGVDTLNLHPGLQTLLEDRFDTLLPVQSLSVENGLFEGD
DQLVVSATATGKTLVGELAGLNRVLDGKGKLLFLVPLVALANQKYEDFQDEYGHLVDVSI
RVGASRIADSGNQFDPNADVIVGTYEGIDHALRTGKDMGDIGTVVIDEVHTLKEEERGHR
LDGLISRLKYTTEKRAAARENYGGAQWIYLSATVGNAEQLGQALEATLIEFEERPVPIER
HVTFADGQEKVNVENKLVRREFDTESSKGYRGQTIIFTNSRRRCHEISRKLEYNAAPYHA
GLDYRRRKRVEKMFADQDLAAVVTTAALAAGVDFPASQVIFDSLAMGIEWLSVQEFHQML
GRAGRPDYHDQGTVYVLVEPDCSYHNSMEMTEDEVAFKLLKGEMEPVMTHYDEDGAIEET
LANITVGGKAAKALNDRMLGEVPTTHAIGKLLEYDFIDGFSPTPLGRVVTEHFLSPGEAF
AIVDGIRKDAHAYDLIADIELRESDL
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaaacaggtccccgaggtcgagacgctcttttgtcacgagaccgggaacgactac
ctcgtggtggtcacccgggacggaaagcggctgttccgggcaaaactcggcgtctcggag
acctcggcgggcccacgacccgcgaaatttcgcgtcaagcgcaactcgagcgaagagcct
cgtcaacccgacgagttcgtcgacctcgctcgccgcgccggccgcatccgcatctccgag
cagacatctcccgagggccgccgggaactcgaggatatgttcgaaggttatcagctcgag
gagaagacgaaagtcgtccggacctgtcgatactgtgcgtcctcgggccggtactctccg
atcacgaccgagacggcgatcaaggacgacgaggactggatctgcaccgactgtgcggcc
cgcgaactcgagcgagaactctcctacgtcgggaacgtgacgggggcagcgaaggaccgc
ctggaggacctcatgctcgaggtgcaggatctccagcgaatcacgaacctgctgaagggg
cggttggacccggacctcacgaagttcgacaccatctcggcgacgaccgacgaggtcgat
caggtgggcgtcgacaccctcaatctgcatccagggctgcaaaccctgctagaggaccgg
ttcgacaccctgttgccagtccagagcctctcggtcgagaacggtctcttcgagggagac
gaccaactggtcgtgagcgccacggcgactggaaagacgctcgtgggtgaactcgcgggg
ctcaaccgcgtgctcgacggcaagggcaaactgctctttctcgtgcccctcgtcgcgctg
gccaatcaaaagtacgaggacttccaggacgagtacggccacctcgtggacgtctccatc
cgcgtcggcgcgagccgaatcgccgactctggcaaccagttcgacccgaacgcggacgtc
atcgtcggcacctacgaggggatcgatcacgccctccggacgggcaaggacatgggcgac
atcggcaccgtcgtcatcgacgaggtccacaccctcaaggaagaagagcgaggtcaccgc
ctcgacggcctcatctcgaggctgaagtacacgaccgaaaagcgtgcggcggcccgcgag
aactacggcggcgcccagtggatctacctctctgcgaccgtcggcaacgccgaacagcta
ggccaagcgctcgaggccaccctgatcgagttcgaggagcgcccggttcccatcgagcgt
cacgtcacgttcgccgatggccaggagaaggtcaacgtcgagaacaaactcgtcagacgg
gagttcgacaccgagtcctcgaaggggtatcggggccagacgatcatcttcaccaattcg
cgcaggcggtgtcacgaaatctctcgaaagctcgagtacaacgcggcgccgtaccacgca
ggactcgattaccggcggcgaaagcgcgtcgagaagatgttcgccgaccaggacctcgcg
gcggtcgtcaccaccgcggcgctggctgcgggcgtcgacttcccggcctcgcaggtgata
ttcgactcgctggcgatgggcatcgagtggctctccgtccaggagttccaccagatgctc
gggcgggcgggacgaccggactaccacgaccaggggaccgtctacgtcctcgtggaaccc
gactgtagctaccacaactcgatggagatgaccgaggacgaggtggccttcaaactcctc
aagggggagatggagccggtgatgacccactacgacgaggacggtgctatcgaggagacc
ctggcgaacattacggtcggcgggaaggcggcgaaggcgctcaacgatcggatgctcggc
gaggtgccgaccacccacgccatcggcaagttgctcgagtacgacttcatcgacggcttc
tcgccgacgccgctggggcgagtggtcacggaacacttcctctcgcccggggaggcgttc
gcgatcgtcgacggcatccgcaaggacgctcacgcctacgacttgatcgcggacatcgag
ttgcgggaatccgatctgtaa
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