Natronosalvus halobius: NGM15_12870
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Entry
NGM15_12870 CDS
T08721
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
halv
Natronosalvus halobius
Pathway
halv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
halv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NGM15_12870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halv03400
]
NGM15_12870
DNA repair and recombination proteins [BR:
halv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NGM15_12870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UvrC_RNaseH
HHH_5
HHH
HHH_2
GIY-YIG
UVR
5_3_exonuc
RecR_HhH
HHH_3
HHH_8
DUF7508
Hairy_orange
Motif
Other DBs
NCBI-ProteinID:
USZ70976
LinkDB
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Position
complement(2633668..2635425)
Genome browser
AA seq
585 aa
AA seq
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MDAETLRERASDLPREPGVYQFRDRDGETTLYVGKAVDLRSRVRSYADPRSARIRRMVDR
ADDLEIAVTDTETQALLLEANLIKRHQPRYNVRLKDDKSYPMVQLTAHEAPRIEITRDPA
EAATVFGPFTNKGRLETVVKALRETYGLRGCSDHKYAGRDRPCLDYEMGLCTAPCTREID
LESYREDVQSAVRFFEGETGVLTDPLRREMETAAGGQQFERAAHLRDRLETVEAFHGDAD
DAVQSMGEGQEHLVDVVGVAIRGEDATVARLRSDRGKLVDRDRHTLEAPATDEGAESAVP
AVLAAFLVQYYAERQLPDALLLPERHGDPEVAGWLEAEGVAVRVPGAGREAKLVELALKN
ARQNVGRRDECGMLADALGLERARRLEGFDVSHAQGSSAVGSNVAFDDGSADKSGYRRKK
LTDENDDYANMRRLVTWRAERALDGRDDRPDPDLLVIDGGRGQLEAALEALEETGWDVPA
IGLAKAEERVVTPDREYDWPRDAPHLHLLQRVRDEAHRFAVQYHQTLRDEVSTVLDDVPG
IGPETRKRLLGRFGSVENVRAASVEDLQSVPGVGERTAQTVKERL
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgagacgcttcgcgagcgagccagcgatctccctcgagagcccggcgtctac
cagttccgcgaccgtgacggcgaaacgacgctgtacgtcggcaaggccgtcgacctccgc
tcacgagtgcgttcgtacgccgacccccggagcgcccgcatccgacggatggtcgaccgc
gccgacgacctcgagatcgccgtcaccgacaccgagacccaggcgctgttgctcgaggcg
aacctgatcaagcgccaccagccccggtacaacgtccggctgaaggacgacaagtcctac
ccgatggtccagctgacggcccacgaggccccacggatcgaaatcacccgcgacccggcc
gaggccgcgaccgtcttcggcccgttcacgaacaagggccgactcgagaccgtcgtcaaa
gcgctgcgggagacctacggtcttcgcggctgttcggaccacaagtacgccggccgggac
cgcccctgcctcgactacgagatggggctctgcaccgccccctgtacccgcgagatcgac
ctcgagagctaccgcgaggacgtgcagtcggccgttcgcttcttcgagggcgaaacgggc
gtgctcacggatcccctccggcgggagatggagaccgccgccgggggccagcagttcgag
cgcgctgcccatctccgggaccgcctcgagaccgtcgaggcgttccacggagatgccgac
gacgccgtccagtcgatgggcgagggccaggagcacctcgtcgacgtcgtcggggtcgcg
attcgcggcgaggacgcgaccgtcgcccgcctgcgttctgaccgcgggaaactcgtcgac
cgcgaccgtcacacgctcgaagcgcccgcgaccgacgagggggcggagagcgccgtcccc
gccgtcctcgcggccttcctggtccagtactacgccgagcgacagctgccggacgcgctg
ttgctccccgagcgccacggcgacccagaggtggccggctggctcgaggccgagggcgtc
gccgtccgcgtgccgggtgccggccgtgaggcgaagctcgtcgaactggcgctgaagaac
gcccgccagaacgtcggccgacgggacgagtgcggcatgctcgccgacgcgctgggtctc
gagcgggcaaggcgactcgaggggttcgacgtgagccatgcccagggctcgtcggcggtc
ggcagcaacgtcgccttcgacgacgggagcgccgacaagtcaggctaccgccgaaagaag
ctcaccgacgagaacgacgactacgccaacatgcgccgactcgtcacctggcgcgccgag
cgagccctcgacggccgagacgaccggcccgacccggacctgctggtgatcgacgggggt
cgggggcagctggaggcggcactcgaggccctcgaggagacaggctgggacgtgccggcc
atcggactggcgaaagccgaggagcgtgtcgtcacccccgatcgagagtacgactggccg
cgggacgccccacacctccacctgctccagcgggtgcgcgacgaggcccaccggttcgcc
gtccagtatcaccagacgctccgcgacgaggtgtcgacggtgctcgacgacgtcccggga
atcgggccagagacgcgaaagcgactgctgggacggttcggcagcgtcgagaacgtccgg
gcggcaagcgtcgaggatctgcagagcgttcccggcgtgggcgagcgaacggcgcagacg
gtcaaggagcggctgtga
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