Natronosalvus halobius: NGM15_14780
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Entry
NGM15_14780 CDS
T08721
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
halv
Natronosalvus halobius
Pathway
halv03022
Basal transcription factors
halv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
halv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NGM15_14780
09124 Replication and repair
03420 Nucleotide excision repair
NGM15_14780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halv03021
]
NGM15_14780
03036 Chromosome and associated proteins [BR:
halv03036
]
NGM15_14780
03400 DNA repair and recombination proteins [BR:
halv03400
]
NGM15_14780
Enzymes [BR:
halv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
NGM15_14780
Transcription machinery [BR:
halv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NGM15_14780
Chromosome and associated proteins [BR:
halv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
NGM15_14780
DNA repair and recombination proteins [BR:
halv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NGM15_14780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
ATPase
AAA_34
AAA_25
SLFN-g3_helicase
STX6_10_61_N
HBB
TSC22
GvpD_P-loop
Motif
Other DBs
NCBI-ProteinID:
USZ73424
LinkDB
All DBs
Position
3033058..3035166
Genome browser
AA seq
702 aa
AA seq
DB search
MDRIYNTLVRGQNVLFEGACGTGKTLSALVPALEVAREQDKTVVITTNVHQQMRQFVAEA
RAITREESIRAVVFKGKASMCHTDVGYEECQTLRDNTRALVEAESDHSQLEQRQRDLLAE
SQAGSESAAEARSAVMDELENLEEQIEDLGEANVCDHYRNNLLDTEATDEFFGWLFEDVR
TPDEIYEYADERELCGYELLKEGLEGVDLVVCNYHHLLDPMIREQFFRWLGRDPDDVIAV
FDEAHNVEDAARDHASRACSERTFDSALDELAETDDPRADDATNVLEAFRDALVETYEDS
FGFGQRGSVGDNWEDVSISNEDRRDDLTLAFLQAYSGQGIEGDLEAARKLGQQLDEEYEE
AYREGETATRTECQTLEAAAFVAAWMDEGADQGLYPVVSVRRDAGTDEVYGRAELYSCLP
RHVTGQLFEAVSGTVLMSATIQPFDVTEDVLGLEECVTMAYGLQFPAERRRTYAVETPAL
FASVRDDPDVQDEVEEAIYDAVRMTPGNTLAFFPNYGEAARYAERLESRTDATVYLDEPG
VGAEELRQKFVADDRAVCCTSLWGTLAEGVSFDGDDAHTVLVVGVPYPHLDDRAEAVQEA
YDTAFEGTDTGWRYAVEIPTVRKTRQALGRVIRSPEDVGVRALLDRRYSRRAKSDLGTYS
VNGTFPHEEREELMDLDPEKLKFAMMNFYGDHDRYAGEPPAP
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcatctacaacaccctcgtgcgtggacagaacgttctcttcgagggcgcctgc
gggaccggcaagaccctctcggcgctcgtgcccgccctcgaggtggcccgcgaacaggac
aagacggtcgtcatcacgacgaacgtccaccagcagatgcgccagttcgtcgccgaggcc
cgggcgatcacccgcgaggagtccatccgcgcggttgtcttcaaggggaaagcttcgatg
tgtcacaccgacgtcggctacgaggagtgccagaccctgcgggacaacacccgcgcgctc
gtcgaggccgagagcgaccacagccagctcgaacagcgccagcgcgacctgctggccgag
agccaggcgggcagcgagtcggccgcggaggcccgcagcgccgtgatggacgaactcgaa
aacctcgaggaacagatcgaggacctcggggaggccaacgtctgtgaccactaccggaac
aacctgctcgataccgaggccaccgacgagttcttcggctggctgttcgaggacgtccgc
acgcccgacgagatctacgagtacgccgacgagcgcgaactctgtggctacgaactgctg
aaggagggcctcgagggggtcgacctcgtggtctgtaactaccaccacctgctcgatccg
atgatccgcgagcagttcttccgctggctcgggcgcgaccccgacgacgttatcgccgtc
ttcgacgaggcccacaacgtcgaggacgccgcgcgcgaccacgccagccgcgcctgctcg
gagcgaaccttcgacagcgcgctggacgaactcgccgaaacggacgacccgcgggctgac
gacgccacgaacgtcctcgaggcgtttcgcgacgcgctggtcgagacctacgaggacagc
ttcggcttcggtcagcgcgggtcggtcggcgacaactgggaggacgtctcgatcagtaac
gaggaccgccgagacgacctcacgctcgccttcctgcaggcgtactcgggccagggtatc
gagggcgacctcgaggccgcgcgtaaacttggccagcaactcgacgaggagtacgaggag
gcctaccgcgagggcgaaaccgcgacccgaaccgagtgccaaaccctcgaggcggccgcg
ttcgtcgcggcctggatggacgagggggccgatcaggggctgtaccccgtcgtctccgtc
cgccgggatgcgggcaccgacgaggtctacggccgggcggagctgtacagctgtctcccc
cgccacgtcaccggacagctcttcgaggccgtctccgggacggtcctgatgagtgcgacc
atccagccgttcgatgtcaccgaggacgtcctcggcctcgaggagtgcgtgacgatggcc
tacgggctgcagtttcccgccgagcgcaggcggacctacgccgtcgagacgcccgcgctg
tttgcctccgtccgtgacgaccccgacgtccaggacgaggtcgaggaggccatctacgac
gccgtccggatgacccccgggaacacgctcgccttcttcccgaactacggcgaagccgcc
cggtacgccgagcgtctcgagtctcgaaccgacgcgacggtctacctggacgaaccgggc
gtcggcgccgaggaacttcgccagaaattcgtcgccgacgaccgtgccgtttgctgcaca
tcgctctgggggaccctcgccgagggtgtgagcttcgacggcgacgacgcccacacggtg
ctggtcgtcggcgttccctacccgcacctcgacgatcgcgccgaagcagtgcaagaggcc
tacgacaccgccttcgaggggaccgacaccgggtggcgctacgccgtcgagatccccacc
gttcggaagacccggcaggcgctcggccgggtgatccgctcgcccgaggacgtcggcgtc
cgcgccctcctcgaccggcggtactcgaggcgcgccaaatccgacctgggaacctacagc
gtcaacggcacgttcccacacgaggaacgggaagaactgatggacctggaccccgagaag
ctcaagttcgccatgatgaacttctacggcgaccacgatcggtacgcgggggagccgccg
gcaccctga
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integrated database retrieval system
