Halomonas alkalicola: B6N23_02525
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Entry
B6N23_02525 CDS
T09267
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
halw
Halomonas alkalicola
Pathway
halw03030
DNA replication
halw03430
Mismatch repair
halw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
halw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B6N23_02525
03430 Mismatch repair
B6N23_02525
03440 Homologous recombination
B6N23_02525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
halw03032
]
B6N23_02525
03400 DNA repair and recombination proteins [BR:
halw03400
]
B6N23_02525
Enzymes [BR:
halw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B6N23_02525
DNA replication proteins [BR:
halw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B6N23_02525
DNA repair and recombination proteins [BR:
halw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B6N23_02525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PAS_4
DNA_pol_A_exo1
PAS
PAS_8
Rv2179c-like
ANIS5_cation-bd
Motif
Other DBs
NCBI-ProteinID:
WLI73831
UniProt:
A0ABY9H5R3
LinkDB
All DBs
Position
524035..526095
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AA seq
686 aa
AA seq
DB search
MARRLSGLPRRQRLIGLWLLLSGISVFGGATFALWLDTLFQPQGLARLVLWLGCFSGGGT
IFLVGLLLERQLFTPLRHLQVQLARLVANPDAREDYPPEGWLRALGPDLVRVRDAWRADR
GRLATAHAEGARSAARIRQELETLLQVLDTPLLLCDQHRRVLLFNQAAETLFEDHHGLGL
GKRLESLLPATSLQDALGQLPRDGSPREVLVPCDERWLRAVLRRVPGSHGETLLTLSDTT
AAWTSEMGARAELLDSLPRLRRHSASLTSAADALSSLGNASGEMRQRLERVIDEESQSLG
QDIEQLAALVEQMQHEGERLVPLWSNDLWQALNERRNGQVTVVPVGMPAWFKGDATALLV
LLGSLIDSLQQQRSPQGLEGEVCLGNKRVYLDLIWRGAPLSERQLTEWQQQRLDDLPLSP
RVADVLRQHASDAWSLADDDGVHARLRLPLPATERVGAPRPATEPRPEFHDFGIAELPPP
DAELAARPLRALEVVAFDTETTGLELRRGDTVISIGACRVVNARLLASEVFDMRVDPGKP
IPPASTAIHGITDADVAGAPPLPVVLPRFRDYVGDAVILAHNAAFDLLALQPPGAGVTLD
MPVLDTLLISRALDASLDGHDLDSLAERYGLSFPPGTRHTALGDARVTAELWLALLPRLE
ARGIETLEQALALQNSALTKEDACAS
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggctcgacgtctctccgggctgccccgccgccagcggttgatcggcctctggctgctg
ctcagcggcatcagcgtcttcggcggcgccaccttcgccctgtggctcgacaccctcttc
caaccccagggactggcccgcctggtgctgtggctgggctgcttctcgggcggcggcact
atcttcctggtcggcctgctgctggagcgccagctgttcaccccgctgcgccacctgcag
gtgcagctcgcgcgcctggtggccaaccccgacgcccgggaggactacccccccgagggc
tggctgcgggcgctgggccccgatctggtgagggtgcgcgatgcctggcgggccgaccgc
ggccgcctggccactgcccacgccgaaggcgcgcgcagcgccgcccgcatccgccaggag
ctcgagaccctgctccaggtgctcgacaccccgctgctgctttgcgaccagcaccgtcgg
gtgctgctcttcaaccaagcggccgagacactcttcgaggatcatcacgggctggggctg
ggcaagcgtctcgagagcctgctgcccgccaccagcctccaggatgccctgggccagctg
ccccgtgacggctcgccgcgggaggtgctggtgccctgtgacgagcgctggctgcgcgcc
gtgctgcgccgggtgcccggcagccatggcgagaccctgctcaccctgagcgataccacc
gccgcctggaccagcgagatgggtgcccgcgccgagctgctcgacagcctgccccgcctg
cgccgccacagcgccagcctgaccagcgcggccgatgccctgagctccctgggcaatgcc
tcgggggagatgcgccagcgcctcgagcgggtgatcgacgaagagagccagtccctcggc
caggacatcgagcagctcgccgccctggtggaacagatgcagcacgagggcgaacggctg
gtgccgctatggtccaacgacctgtggcaggccctcaacgagcgtcgcaacggccaggtc
acggtggtgccggtcggcatgcccgcctggttcaagggcgacgccacggcgctgctggtg
ctgctgggctccctgatcgacagcctccagcagcagcgcagcccgcagggtctcgagggc
gaagtctgcctgggcaataagcgggtctacctggacctgatctggcgcggggcaccgctc
agcgagcgccagctcaccgagtggcagcagcagcgcctcgacgacctgccgctctcgccg
cgggtcgccgacgtgctgcgccagcatgcaagcgacgcctggagcctggccgatgacgac
ggcgtgcatgcccgcctgcgcctgccgctgcccgccaccgagcgggtcggggcgccgcgc
ccggccaccgagccgcgtccggagttccacgacttcggcatcgccgagctgcccccgccg
gacgccgagctcgcggcccgcccgctgcgggccctggaggtagtggccttcgacaccgag
accaccggcctggaactgcggcgcggcgacaccgtgatcagcatcggcgcctgccgggtc
gtcaacgcccggctgctggccagcgaggtgttcgacatgcgggtcgatcccggcaagccg
atccccccggccagcaccgcgatccacggcatcaccgacgccgacgtggcgggcgccccg
ccgctgccggtggtgctgccgcgctttcgcgactacgtgggcgacgcggtgatcctcgcc
cacaacgccgccttcgacctgctcgccctgcagccgccgggggccggcgtgaccctcgac
atgccggtgctcgacacactgctgatctcgcgggccctggatgccagcctggatggccac
gacctcgacagcctggccgagcgctacggactgagtttcccgccgggcacgcggcatacc
gccctgggcgacgcccgggtcaccgccgagctgtggctggccctgctgccacgcctggag
gcccgcggcatcgagaccctggagcaggcgctggccctgcagaacagcgccctgaccaag
gaggatgcctgcgcctcatga
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