Halomonas alkalicola: B6N23_02630
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Entry
B6N23_02630 CDS
T09267
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
halw
Halomonas alkalicola
Brite
KEGG Orthology (KO) [BR:
halw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
halw03032
]
B6N23_02630
03036 Chromosome and associated proteins [BR:
halw03036
]
B6N23_02630
03400 DNA repair and recombination proteins [BR:
halw03400
]
B6N23_02630
DNA replication proteins [BR:
halw03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
B6N23_02630
Chromosome and associated proteins [BR:
halw03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
B6N23_02630
DNA repair and recombination proteins [BR:
halw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
B6N23_02630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
WLI73847
LinkDB
All DBs
Position
542485..542781
Genome browser
AA seq
98 aa
AA seq
DB search
MTKSELIEQIAARQPELSIKEVEAAVRLILDDITDTLAEGGRVEIRGFGSFSLHYREPRV
GRNPKTGEPVALEGKFVPHFKPGKELREQVDASRALGY
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccgagttgatcgagcagatcgccgcacggcagccggagctgtcgatcaag
gaagtcgaggctgccgtgcgcctcatcctcgacgacatcaccgacaccctggccgaaggg
ggccgcgtcgagattcgcggcttcggcagcttctcgctgcactaccgggagccccgggtc
ggccgcaaccccaagaccggcgaaccggtcgcgctggaaggcaagttcgtgccacacttc
aagccaggcaaggagctgcgcgagcaggtagacgccagccgcgccctgggctactga
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integrated database retrieval system
