Halomonas alkalicola: B6N23_03075
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Entry
B6N23_03075 CDS
T09267
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
halw
Halomonas alkalicola
Brite
KEGG Orthology (KO) [BR:
halw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
halw03009
]
B6N23_03075
Ribosome biogenesis [BR:
halw03009
]
Prokaryotic type
ribosomal protein modification factors
B6N23_03075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
WLI73927
LinkDB
All DBs
Position
complement(631338..633548)
Genome browser
AA seq
736 aa
AA seq
DB search
MEIKVNYLDNLRLEAKFDDFTVISDQPIRYKGDGSAPGPFDYFLASSAMCAAYFVKVYCN
ARDIPTENIRLSQNNIVDPENRYKQIFRIQIELPEDISEKDRQGILRSIDRCTVKKVVQE
GPEFQIEVVENIDEDAQALLMGQPDGDDYTWIEGKDLPLEQTIANMTGILAELGMKIEIA
SWRNIVPHVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERTNFNFFYNDQFFGEE
IADAEFVHYPDEKWFQPGPGDALPAEILDDYTREIYDPEGELCGSHLIDTNSGRADRGIV
SLPFVRHSDGETVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKRKIIEEEL
ALPDVPAEVLARYPEIVEGIEALEAQGFPVLVKDASLGGQFPVMCVTLMNPKTGGVFASF
GAHPSFHVALERTFTELLQGRSIEGFNDFLPPTFNSMAVTEPNNYVEHFIDSSGVISWRF
FSARSDIDFCDWDFSGSGANSNEQEAATLFGILEELELEAYVAVRDELGAPTCRILVPGF
SEVYPVEDLVWDNTNVALQYREEILNLHRLEDDRLAELLERLEESQLDEHMDIITLIGIE
FDENTDWGQLTILELKLLLNLALGQHEEALERVEMFLQYNDNTVERNLFYRAVQAVLEIV
LDDELEVDDFRHNLGRMFGEATIEAVIGSVLGTVRFHGLTPTSMALEGLEKHQRLIESYR
KLHAARARRAGMRAPA
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaactatctcgacaacctccgcctggaggccaagttcgacgacttc
acggtcatctccgaccagcccattcgttacaagggcgacggctcggcgccggggcccttc
gactacttcctggcctcctcggcgatgtgtgcggcctacttcgtcaaggtctactgcaac
gcccgggacatccccaccgagaacatccggctgtcgcagaacaacatcgtcgacccggag
aaccgctacaagcagatcttccgcatccagatcgagctgcccgaggatatctccgagaag
gaccgccagggcatcctgcgctccatcgaccgctgtacggtgaagaaggtggtgcaggag
ggccccgagttccagatcgaggtggtcgagaacatcgacgaggacgcccaggcgctgctg
atgggccagcctgacggcgacgactatacgtggatcgagggcaaggacctgccgctggag
cagaccatcgccaacatgaccggcatcctggccgagctcggcatgaagatcgagatcgcc
tcctggcgcaacatcgtgcctcatgtgtggtcgctgcatatccgcgatgccgcctcgccg
atgtgcttcaccaacggcaagggcgccaccaaggagagcgcgctctgctcggcgctgggc
gagttcatcgagcgcaccaacttcaacttcttctacaacgaccagttcttcggcgaggag
atcgccgacgccgagttcgtccactaccccgacgagaagtggttccagcccgggccgggc
gacgcgctgccggcggagatcctcgacgattacacccgggagatctacgacccggagggg
gagctctgcggctcgcacctgatcgacaccaactccggccgggcggatcgcggcatcgtt
tcgctgcccttcgtgcgccactccgacggcgagacggtctacttcccctcgaacctgatc
gagaacctctacctcagcaacggcatgagcgcggggaacaccctggccgaggcccaggtg
cagtgtctctcggagatcttcgagcgggcggtgaagcgcaagatcatcgaggaggagctg
gcgctgcccgacgtgccggccgaggtgctggcgcgctatccggagatcgtcgagggcatt
gaggcgctggaggcccagggcttcccggtgctggtcaaggatgcctcgctcggcggccag
ttcccggtgatgtgcgtcaccctgatgaaccccaagaccggcggcgtcttcgcctctttc
ggcgcccacccgagcttccacgtggccctggagcgcaccttcaccgagctgctgcagggg
cgcagcatcgagggcttcaacgactttctgccgcccaccttcaactccatggcggtgacc
gagcccaacaactacgtcgagcacttcatcgactcctccggggtgatctcctggcgcttc
ttcagcgcccgctcggatatcgacttctgcgactgggacttctccggcagcggcgccaac
agtaacgagcaggaggcggcgaccctgttcggcatcctcgaggagctggagctcgaggcc
tacgtggccgtgcgcgacgagctcggcgcgccgacctgtcgcatcctggtaccgggcttc
tccgaggtctatccggtggaggatctggtgtgggacaacaccaacgtggcgcttcagtac
cgcgaagagatcctcaacctgcaccgcctggaggatgaccggcttgccgagctgctcgag
cgcctggaggagagccagctcgacgagcacatggacatcatcaccctgatcggcatcgag
ttcgatgagaacaccgactggggccagctgaccatcctcgagctgaagctgctgctcaac
ctggcgctgggccagcacgaggaggccctggagcgggtcgagatgttcctgcagtacaac
gacaacaccgtggagcgcaacctcttctaccgcgcggtgcaggcggtgctagagatcgtg
ctggatgacgagctggaggtcgacgacttccgccacaacctcggccgcatgttcggcgag
gcgaccatcgaggcggtgatcggttcggtgctgggcacggtgcgcttccacggcctcacg
cccaccagcatggccctggaggggctggagaagcatcagcgcctgatcgagagctacagg
aagctccacgccgcccgggcccgccgggcggggatgcgcgccccggcctga
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