Halomonas alkalicola: B6N23_05710
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Entry
B6N23_05710 CDS
T09267
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
halw
Halomonas alkalicola
Brite
KEGG Orthology (KO) [BR:
halw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halw03400
]
B6N23_05710
DNA repair and recombination proteins [BR:
halw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B6N23_05710
Archaeal homologous recombinant proteins
B6N23_05710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
Prefoldin_2
nSTAND3
RsgA_GTPase
AAA_22
cobW
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
WLI74401
LinkDB
All DBs
Position
1189323..1192643
Genome browser
AA seq
1106 aa
AA seq
DB search
MKILALRLENLASLPGPLELDFTASPLSDASLFAITGPTGAGKSTLLDALCLALYGSTPR
LRQAPARDSQIDDTPDSRLTTSDARTLLRRGTASGYAEVDFLGRDGRRYRARWAVRRARE
KATGRLQAAEQSLTDLDDERLLTAQKREFERLLPERLGLTFDQFTRAVLLAQSEFAAFLQ
ADDNARSDLLERLTGTAEYSEISMAAYRRASEARKTVEALEAKLADDLPAEPEARAEFER
AAEATQQALTHLQTQAESLQATRRWHEEDDRRHAAHAEGLAQQQAAEATWQDLAEARRDR
DWRRLIAPRRHALARQAALPAELDALAATRRETDEALATAEAEHKAAGRALAEAEQALTH
AGEARQRAEPALHEARAHQHALSQRQRELAECETQLTQARAQAAKLSDDHQREQAAQQKR
HEQQRQWQAALAELLGEHSHLAAARQADQQAHDRAAARTLALEALASRWQEYQRAEEACR
HQAHQQTTDRERRERLLAEGQTARQALDRAQGHLESVTALIERSRAVRSESVARLRDGLR
EGEPCPVCGGQDHPWRHQPPATPEAAQLAAQEAEEGRQLESARQARDDAQARRDSLLGEY
RALEAALAQGERTLAGAEVRLAEARTALMEHPLQDELDAVEAPGREAWLQTRRHESEASR
RQAQRTLEALARAEAELAPLEESLRQGELALTRLEGDKARADRDLTELEQRLPELQRQHD
DTLRALRALLGEHASAEAWQQRLDAAEAEARQARDGALALRHAAEQAQQRLAQRQEHLAE
RLNALQQERDDLARELTDWRTQHPALDDANLARLLAQDDAEAREEEREIEAADQARQQAG
AALAERRRALLAHRRDGGLGEQASGEDEADDEALLSDRTAEAIAQRREALAARQAELAPR
LAAAQGERDAAAFALADDDRRRERQRAGQGELEAAQAEYRRWGRISELIGSADGKVFRRI
AQAYNLEQLLEHANAHLAGLTRRYRLARGGSPLGLLVVDQDMGDETRSVHSLSGGETFLV
SLALALGLASMASGELTIESLFIDEGFGSLDPQSLALAMEALDGLQALGRRVGVISHVQE
MHERIPVQIRVEPLGNGTSRARIVSA
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccttgccctgcgcctggagaacctggcctcgctgccggggcccctcgagctc
gacttcaccgcctcgccgctcagcgacgccagcctgttcgccatcaccggccccaccggc
gccggcaagagcacccttctcgacgccctgtgcctggcgctctacggcagtaccccgcgg
ctgcgccaggcgccggcccgcgacagccagatcgatgacaccccggactcccgcctcacc
accagcgatgcgcgcaccctgctgcgccgcggcaccgccagcggctacgccgaggtggat
ttcctgggccgcgacggacgccgctaccgcgcccgctgggcggtgcgccgcgcccgggag
aaggccaccggccgcctgcaggcggcggagcaatcgctcaccgacctcgacgacgagcgc
ctgctgaccgcccagaaacgtgagttcgagcgcctgctgccggagcgcctggggctcacc
ttcgaccagttcacccgcgccgtgctgctggcccagagcgagttcgccgccttcctccag
gccgacgacaacgccagaagcgatctgctggagcgcctcaccggcaccgccgagtactcc
gagatctccatggccgcctaccgacgcgccagcgaggcgcgaaagacggtggaggccctg
gaggcgaagcttgccgacgacctgcccgccgagcccgaagcccgtgcagagttcgagcgt
gccgccgaggccacccagcaagcccttactcacctgcagacccaggcggaatcgctccag
gcgacgcgccgctggcacgaggaggacgaccggcgccacgcggcccatgccgagggcctg
gcgcaacagcaggccgccgaggcgacctggcaggatctcgccgaggcccgccgcgaccgc
gactggcgccggctgatcgccccccggcggcacgccctggcccgccaggcggccctgccc
gccgagctcgacgccctggcggcgacccggcgcgagaccgacgaggcactggccaccgcc
gaggccgagcacaaggccgccgggcgcgccctggccgaggccgagcaggccctcacgcac
gccggcgaggcacgccagcgcgccgaaccggcccttcatgaggcccgggcgcaccagcac
gccctcagccagcgccagcgcgagctggccgagtgcgagacccagctcacccaagcccgg
gcgcaggccgccaagctgagtgacgaccaccagcgcgagcaggccgcccagcagaagcgc
catgagcagcagcgtcagtggcaggcggccctggccgagctgctgggtgagcactcacac
ctggcggccgcccgccaggccgaccagcaggcccacgatcgggccgccgctcgcaccctc
gccctggaggcgctggccagccgctggcaggaataccagcgtgccgaagaggcgtgccgc
caccaggctcaccagcaaacgaccgaccgcgagcggcgcgagcgcctgctggccgagggg
cagacggctcgccaggccctcgaccgggcccagggccacctggagagcgtcaccgccctg
atcgagcgcagccgcgccgtacgcagcgagagcgtggcccggctgcgcgatggcctgcgg
gaaggcgagccctgtcccgtctgcggtgggcaggaccacccctggcgccatcagccgccg
gccacccccgaggcggctcagctcgccgcccaggaggccgaggaggggcgccagctcgag
tccgcccggcaggcccgcgacgatgcccaggcccggcgagattccctgctgggcgagtac
cgcgccctggaggccgcccttgcccagggcgagcggacgctggcaggcgccgaagtccgc
ctggcggaggcccgcacggccctgatggagcatccgctccaggacgagctcgacgccgtg
gaggcgccgggccgggaggcctggctgcagacccggcgccacgagagcgaggcgagccgc
cggcaggcccagcggaccctggaggcgctggcgcgggccgaagccgagctcgcccccctg
gaggagtcgctgcgccagggtgagctggccctcactcgcctggagggcgataaggccagg
gccgaccgcgacctgacggaactggagcagcgcctccccgagctgcagcgccagcatgac
gacaccctgcgtgccctgcgcgccctgctcggcgagcacgcctcggcggaggcatggcag
cagcgactcgatgccgccgaggccgaggcccgccaggcccgggacggcgcgctggccctc
cgccacgccgccgaacaggcgcagcagcgtctggcccagcgtcaggagcacctggccgag
cggctcaacgccctgcagcaggagcgcgacgacctcgcccgcgaactcaccgactggcgg
acccagcaccccgcgctggacgacgctaacctggcgcgattgctggcccaggacgacgcc
gaggcccgggaggaggagcgcgagatagaggcggccgaccaggctcgccagcaggccggc
gccgccctggccgagcggcgccgggcgctgctcgcccaccgccgcgacggggggctgggc
gagcaggcgtcaggagaggatgaggccgacgacgaggcactgctgagcgatcgcaccgcc
gaggcgatcgcccagcgacgggaggcactggcggcgcgccaggccgaactcgccccgcgg
ctggcggccgcccagggcgagcgtgacgccgccgccttcgcgctggccgacgacgaccgc
cgccgtgagcgccagcgggccggccaaggcgagctggaagccgcccaggccgagtaccgc
cgctggggccggatcagcgagctgatcggctccgccgacggcaaggtgttccggcgcatc
gcccaggcctacaacctggagcagctgctcgagcacgccaatgcccacctggcggggctg
acccgccgctaccgcctggcgcggggcggatcgcccttgggcctgctggtagtggatcag
gacatgggcgatgagacgcgctcggtgcactcgctctccggcggggagaccttcctggtc
tccctggcgctcgctctggggctcgcctccatggcctccggcgagctcaccatcgagtcg
ctgtttatcgacgaggggttcggcagcctggacccgcagtcgctggccctggccatggag
gcgctggacggcctgcaggcgctgggccgccgggtgggggtaatctcccacgtgcaggag
atgcacgagcgaatcccggtgcagataagggtggagccgctgggcaacggtaccagccgc
gcgcgcatcgtcagcgcctga
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