KEGG   Halomonas alkalicola: B6N23_05870
Entry
B6N23_05870       CDS       T09267                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
halw  Halomonas alkalicola
Brite
KEGG Orthology (KO) [BR:halw00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:halw02048]
    B6N23_05870 (hsdR)
Enzymes [BR:halw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     B6N23_05870 (hsdR)
Prokaryotic defense system [BR:halw02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   B6N23_05870 (hsdR)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 Helicase_C DEAD DUF4145 HSDR_N AAA_19 SLFN-g3_helicase
Other DBs
NCBI-ProteinID: WLI74430
LinkDB
Position
complement(1223139..1226675)
AA seq 1178 aa
MQGPPGRGDGGSAGQDAGGNFAFLTGHDPVFLELAASAERAFSHDPNTTLIKLRQLGEAM
AQDIAARLGIGVDERTGQRDLLYRIDSALGLDPTVRELFHTLRIEGNRATHQFRTQHREA
IQGLKVARSLAVWFHRAFADPDFKPGAFRPPEDPSRELRELQAQMARLQGELVTATEQAD
AQRQLAELEAREKQEYAELAEAMDEEARALAEQSRAQQAELERREREFQRRLAEQARTGA
ESEPPRALRQRVGQADRALNAQLGLDEELTRLLIDQQLQEAGWEADTLELTWQKGVRPEA
DRTLAIAEWELPNGQRADYVLFHGLVPIGVVEAKRQNIDVAGKLAQAERYARGFDRRGFA
GGITPAWEEEGRTVAWPDDAEGHFHVPFVFSCNGRPYLPQLAEKSGIWFRDVREPGNLAR
ALPHFHSPEGLLDRLKRSRALAEQRLREEDFGYLRLRDYQENAIRAVEAALEEGAPRALL
AMATGTGKTRTIIGLIYRFLKTERFRRVLFLVDRTALGQQAQDAFDEAPLEQNHTLSQIY
NVATLGDMAAEAETRVQVATVQAMARRLFMADAPPPVDAYDCIIVDEAHRGYTLDQEMTE
GELATRDAGQYLSRYRRVLDHFDAVRIGLTATPAKHTSEIFGRPVFTYSYREAVADDWLI
DHEPPIRYETLLSQKGIHFAKGETVSLIDSRTGEVESAELEDELDFEIEAFNRRVIAPEF
NRVICEQLARELDPFGEEKTLIFCATDLHADMVKRLLDEAFHAHYGEAYRQAAVAKITGK
ADKVDDLIRRYKNDKYPNIAITVDLLTTGIDVPRICHLVFLRRVKSRILYEQMIGRATRR
CDEIGKTVFTIYDPVDLYAALAEVNTMQPLVKDPGVTLEQLHEELSDPAQLARALEAPGQ
AAGESHADDVLDQYSQMLMRVMRKATKHAEGRDDLRQQLESLEQSWGVAPEKLHQHLREL
GPRAAASFLHQHAGLLGQVAEVKTLLGSERLPLIYEGSDELLGRTQSYGVHEKPADYLES
FEAFICERLNDSVALGVVVNRPRDLTRETLKEVRLLLDGAGYSEARLESAWRNTTNQEIA
ASIVGHIRRAALGEALVPFEQRVRDAMQRIYALHSWTPAQRKWLDRLAKQLTHEVVLDRD
FIHQRFAEQGGIQRLDAVLDHHLDEVLEALNDALWEAS
NT seq 3537 nt   +upstreamnt  +downstreamnt
atgcagggaccaccaggccgcggggatggcggcagcgccgggcaggatgccggcggcaac
ttcgcctttctgaccggccacgacccggtctttctcgagctcgccgccagcgccgagcgc
gccttcagtcacgatcccaacaccaccctgatcaagctgcgccagctcggcgaggccatg
gcccaggacatcgctgcccgtctgggcatcggagtggacgagcgtaccggccagcgcgac
ctcctttaccgcatcgacagcgccctggggctcgaccccaccgtgcgtgagctcttccac
accctgcgcatcgaaggcaaccgcgccacccaccagttccgcacccagcaccgcgaggcg
atccagggactcaaggtcgcccgcagcctggcggtctggtttcatcgcgccttcgctgac
cccgacttcaagcccggcgcctttcgtccaccggaagaccccagccgcgagctgcgcgag
ctccaggcccagatggcgcgcctgcagggcgagctggtcactgccaccgagcaggccgat
gcccagcgccagctggccgagctggaagcccgcgagaagcaggagtacgccgagcttgcc
gaggccatggacgaggaggcccgcgccctggccgagcagtcgcgggcccagcaggcggaa
ctcgaacgccgcgagcgggagttccagcggcgcctggccgagcaggctcgcacgggggcc
gagagcgagccgccccgggcgctgcgccagcgggtcggtcaggccgaccgcgcgctcaac
gcccaactgggtctggatgaagagctcacccgcctgctgatcgaccagcagctccaggag
gccggctgggaggccgataccctggaactcacctggcagaagggcgtgcgcccggaggcc
gaccggaccctcgccatcgccgagtgggagctgcccaacggccagcgcgccgactacgtg
ctgttccatgggctggtgcctatcggcgtggtggaggccaagcgccagaatatcgacgtg
gccggcaagctcgcccaggcggagcgttacgcccgcggcttcgatcggcgcggctttgcc
ggcggcatcaccccggcgtgggaggaggaggggcgcaccgtcgcctggcccgacgacgcc
gagggccattttcatgtgcccttcgtcttctcgtgcaacggccggccctatctgccgcag
ctggccgagaagtccggcatctggttccgcgacgtgcgcgaacccggcaacctggcccgg
gcgctgccgcacttccacagccccgagggcctgctcgaccgcctcaagcgcagccgtgcc
cttgccgagcagcgcctgcgcgaggaggacttcggctacctgcgcctgcgcgactatcag
gagaacgccatccgtgccgtggaggccgccctggaagagggcgcgccccgtgcgctgctg
gccatggccaccggcaccggcaagactcgcaccatcattggcctgatctaccgattcctg
aagaccgagcgctttcgccgcgtgctcttcctggtggatcgcaccgccctgggccagcag
gcccaggacgccttcgacgaggcgccgctggagcagaatcacacgctttcacagatctac
aacgtcgccaccctgggcgacatggccgccgaggccgagacccgggtgcaggtcgccacg
gtgcaggctatggcgcggcggctcttcatggccgacgccccgccgccggtggacgcctac
gattgcatcatcgtggacgaggcccaccgcggctacaccctggatcaggagatgaccgag
ggggagctggccacccgcgacgccggccagtatctctcccgctaccgccgcgtgctcgac
cacttcgacgccgtgcgcatcgggctcaccgccacaccggccaagcacaccagcgagatc
tttggccggccggtcttcacctactcctaccgggaggcggtggccgacgactggctgatc
gaccacgagccgccgatccgctacgagaccctgctcagccagaagggcatccacttcgcg
aagggcgagacggtcagcctgatcgattcccgcaccggcgaggtggagagcgccgagctg
gaggacgagctcgacttcgagatcgaggccttcaaccggcgggtgatcgcgccggagttc
aaccgtgtgatctgcgaacagctggcccgggagctcgaccccttcggcgaggagaagacg
ctgatcttctgcgccaccgacctgcacgccgacatggtcaagcgcctgctcgacgaggcc
ttccacgcccactacggcgaggcctaccgccaggccgcggtggccaagatcaccggcaag
gcggacaaggtcgacgacctgatccgccgctacaagaacgacaagtaccccaatatcgcc
attaccgtggacctgctcaccaccggcatcgacgtgccgcgcatctgccacctggtgttc
ctgcgccgggtgaagtcgcgcatcctctatgagcagatgatcggccgcgccacccgccgc
tgcgacgagatcggcaagacggtgttcaccatctacgatccggtggacctctatgcggcg
ctcgccgaggtcaacaccatgcagccgctggtcaaggaccccggcgtgacactggagcag
ctgcacgaggagctcagcgacccggcgcagctggcgcgggccctggaggcccccggccag
gcggccggggagagccacgccgatgacgtcctcgaccagtacagccagatgctgatgcga
gtgatgcgcaaggctaccaagcacgccgaagggcgcgacgacctgcgccagcagctggag
agcctcgagcagagctggggcgtggcgccggagaagctccaccagcacctgcgcgagctg
ggcccccgggccgcggccagcttcctgcaccagcatgccggcctgcttggccaggtggcc
gaggtgaagacgctgctcggcagcgagcgtctgccgctgatctatgaaggcagcgacgag
ctgctgggccgcacccagagctacggggtgcacgagaagcccgccgactacctggagagc
ttcgaggccttcatatgcgagcggctcaacgactcggtggcgctgggcgtggtggtcaat
cgcccccgggacctcacccgcgagaccttgaaggaggtgcgcctgctgctcgacggcgcc
ggctacagcgaggcccggctggagagcgcctggcgtaacaccaccaaccaggagatcgct
gccagcatcgtcggccatatccgccgtgccgccctgggcgaggcgctggtgcccttcgag
cagcgggtgcgcgacgccatgcagcgcatctacgccctgcatagctggacacccgcccag
cgcaagtggctcgaccgcctggccaagcagctcacccacgaagtggtgctcgaccgcgac
ttcattcaccagcgcttcgccgagcaggggggcatccagcgcctggatgccgtgctcgac
catcacctcgacgaggtcctcgaggccctcaacgatgccctctgggaggcgagctga

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