KEGG   Halomonas alkalicola: B6N23_07900
Entry
B6N23_07900       CDS       T09267                                 
Name
(GenBank) DHHA1 domain-containing protein
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
halw  Halomonas alkalicola
Pathway
halw03410  Base excision repair
halw03430  Mismatch repair
halw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:halw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    B6N23_07900
   03430 Mismatch repair
    B6N23_07900
   03440 Homologous recombination
    B6N23_07900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:halw03400]
    B6N23_07900
DNA repair and recombination proteins [BR:halw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     B6N23_07900
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     B6N23_07900
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      B6N23_07900
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1 GGDEF_2
Other DBs
NCBI-ProteinID: WLI74784
LinkDB
Position
complement(1665751..1667553)
AA seq 600 aa
MNAASDPIELSERLRPRILPRPRDAALYARAQREGLSELQARILAGRLAGFTGEIGPLVT
PSLRHLAHPDRLADGRRAAERIARAVVDGEHIGILTDYDVDGITSHVVIRRTLVELFGVP
EAKLHSLIGHRIHDGYGISLPLVERTLALSPRPTLVITADCGSSDEPRIARLAAAGIDVV
VSDHHALPVEGPPPSAHAVVNPTREDCAYPDPTIAGCMVAWLVMSLARGVLIEWGVLAET
TPKLSPWLSYVALGTVADCVSLGGSPANRAAVTHGLALINRMEAACWRAMAERLGADSVP
FDAETLGFQMGPRINARSRLDDPYAALHFMLAEQDHVASRYLDVLDQDNQSRKAIEADMA
EEAKALALPALAAGEPAVVVFLESGHPGVQGIVASRLVQAYGRPALVLTPAAAPGMLTGS
GRSIEGLHLRDALQRTYELAPEALPRFGGHRGAAGVGVPVDRLDAFKAAFLQAVGEQLGG
AALYPKILTDGELGADQLSLATLDELQALGPYGREFEAPLFQGDFVVEALRPVGADGTHL
MLELSSGPVSLKAIWFRALTPGEIPAFGVGDRLRCAYKLNRNRWRGRESLQLMVEHAAPS
NT seq 1803 nt   +upstreamnt  +downstreamnt
gtgaacgccgcaagcgatcccatcgaactgagtgagcgcctgaggccgcgcatcctgccg
cggccccgggacgccgccctctatgcccgcgcccagcgcgaggggctctccgagctccag
gcgcggatcctcgccgggcgcctggcgggcttcacgggcgagatcggccccctggtcacg
cccagcctgcgccacctggcccaccccgaccggctcgccgatggccgccgtgccgccgag
cgcatcgcccgcgcggtggtcgacggcgagcatatcggcatcctcaccgactacgacgtg
gacggcatcacctcccacgtggtgataaggcgcaccctggtggagctcttcggcgtgccg
gaggcgaagctgcacagcctgatcggccaccgcatccatgacggctacggcatcagcctg
ccgctggtggagcgcaccctcgccctctcgccgcgcccgaccctggtgatcaccgccgac
tgcggaagctccgatgagccgcgtattgcgcggctggccgcggcgggtatcgacgtggtg
gtcagcgaccaccacgccctgccggtggaggggcccccgccctcggcccatgccgtggtg
aaccccacccgagaggactgcgcctaccccgaccccaccatcgccggctgcatggtggcc
tggctggtgatgtcgctggcccgcggcgtgctgatcgagtggggcgtgcttgctgaaacc
acgcccaagctttcgccctggctctcctatgtggcgctcggcaccgtggcggactgcgtc
tccctgggcggcagccccgccaatcgcgccgcggtgacccacgggctggccctgatcaac
cgcatggaggccgcctgctggcgggccatggccgagcgcctgggcgccgacagcgtgccc
ttcgacgccgagaccctgggcttccagatggggccgcggatcaacgcccgctcgcggctc
gacgacccctatgcggcgctgcactttatgctcgccgagcaggatcatgtggcaagccgc
tacctcgacgtgctcgaccaggacaaccagtcgcgcaaggcgatcgaggccgacatggcc
gaggaggcgaaggcgctggcgctgccggcgctggccgccggcgagcccgccgtggtggtg
tttctggagagcggccaccccggcgtgcagggcatcgtggcgtcccgcctggtgcaggcc
tacgggcgcccggcgctggtgctgaccccggcggcggcccccggcatgctcaccggctcc
gggcgctccatcgaggggctgcacctgcgcgatgccctgcagcgcacctacgagctggcc
ccggaggcgctgccccgcttcggtggccaccgcggcgccgccggcgtcggcgtgccggtg
gaccggctcgacgccttcaaggcggccttcctgcaggcggtgggcgagcagctgggcggg
gcggcgctctacccgaagatcctcaccgacggcgagctgggggcggatcagctgagcctg
gcgaccctggacgagctgcaggcgctgggcccctatggccgcgagttcgaggcgccgctg
ttccagggtgacttcgtggtggaggcgctgcggccggtgggggccgatggcacccacctg
atgctggagctctcctccgggccggtcagcctcaaggcgatctggttccgggccctgacc
cccggcgagatccccgccttcggcgtcggggataggctgcgctgcgcctacaagctcaac
cgcaatcgctggcggggtcgcgagagcctgcagctgatggtggagcacgccgcgccgagc
tga

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