Halomonas alkalicola: B6N23_09105
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Entry
B6N23_09105 CDS
T09267
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
halw
Halomonas alkalicola
Pathway
halw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
halw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B6N23_09105 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halw03019
]
B6N23_09105 (pnp)
03016 Transfer RNA biogenesis [BR:
halw03016
]
B6N23_09105 (pnp)
Enzymes [BR:
halw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
B6N23_09105 (pnp)
Messenger RNA biogenesis [BR:
halw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B6N23_09105 (pnp)
Transfer RNA biogenesis [BR:
halw03016
]
Prokaryotic type
tRNA degradation factors
B6N23_09105 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
WLI71979
UniProt:
A0ABY9H0Q7
LinkDB
All DBs
Position
complement(1907415..1909550)
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AA seq
711 aa
AA seq
DB search
MNPVKKTFQYGRSAVTLETGRIARQASGAVMVTMDDTVVLCTVVARKEANPNQPFFPLSV
HYQEKTYAVGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPKGFMNEVQVVCSVLSTD
RNHDPDIAAMLGTSAALAISGVPFNGPIAAARVGFDEEKGYFLNPTVEELAGSELNMVVA
GTEKAVLMVESEADELLEDEMLGAVLYGHQEMQVAIQAINELTAEAGKPKWEWQAPAENT
ELKAAVAGAFEARVGEAYRITDKMARQDALSALKAEAVEQLAGEEEGKFDAEEVKGAFAG
LEKRVVRSRVVKGEPRIDGRDHKTVRPLAIEVGSLPKTHGSAIFTRGETQAIVVATLGTL
RDSQLIESLEGERKDRFMLHYNFPPYSVGEAGFMGGPKRREIGHGRLARRGVQAMLPDDA
EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKDDDGFAVLT
DILGDEDHLGDMDFKVAGTSEGVTALQMDIKIEGINEEIMEQALQQALEARLSILEQMNA
VIGQSRAEVSENAPSMATIKIDPEKIRDVIGKGGSTIRKICEDTGASIDLDDDGTVRIYA
EDKKAAKAAIDTVLAITAEAEIGKLYRGKVVRIADFGAFVNIMPGTDGLVHISQIVPERV
NDVRDFLNEGDEVVVKVLDIDNRNRVKLTIKEITPEEKAAFEAEAAAEPVL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccggtcaagaagacatttcagtacggtcgcagcgccgtcaccctggaaaccggg
cgcatcgcccgccaggcctccggtgccgtcatggtcaccatggacgacaccgtggtgctc
tgcaccgtggtggcccgcaaggaagccaaccccaaccagccgttcttcccgctctccgtg
cactaccaggagaagacctatgcggtcggcaagattcccggcggcttcttcaagcgcgag
gggcgtcccaccgagaaggagaccctcacctcgcggctgatcgatcgcccgatccgcccg
ctcttccccaagggcttcatgaacgaggtgcaggtagtctgctcggtgctctccaccgac
cgcaaccatgacccggacatcgctgccatgctcggcacctccgcggccctggccatctcc
ggggtgcccttcaacggccccatcgccgcggcccgcgtcggcttcgacgaggagaagggc
tacttcctcaaccccaccgtcgaggagctcgccggctccgagctcaacatggtggtggcc
ggcaccgagaaagcggtgctgatggtggagtccgaggccgacgagctgctcgaggacgag
atgctgggcgccgtgctctacggtcaccaggagatgcaggtggccatccaggccatcaac
gagctgaccgccgaggcgggcaagcccaagtgggagtggcaggccccggcggagaacacc
gagctcaaggccgccgtggccggcgccttcgaggccagggtgggtgaggcctaccgcatc
accgacaagatggcccgccaggatgcgctctccgccctcaaggccgaggccgtcgagcag
ctggccggtgaggaagagggcaaattcgacgccgaggaggtcaagggcgcttttgccggc
ctcgagaagcgcgtggtgcgctcccgggtggtcaagggcgagccgcgcatcgacggccgc
gaccacaagacggtgcgtcccttggccatcgaggtgggcagcctgcccaagacccacggt
tcggcgatcttcacccggggcgagacccaggccatcgtggtggcgaccctcggcaccctg
cgcgactcccagctgatcgagtctctggaaggggagcgcaaggaccgcttcatgctccac
tacaacttccccccctacagcgtgggcgaggcgggcttcatgggcggccccaagcgtcgc
gagatcggccacggccgcctggcgcgccggggcgtgcaggccatgctgcccgacgatgcc
gagttcccctacaccatccgcgtggtctccgagatcaccgagtccaacggctccagctcc
atggcgtccgtgtgcggcgcctccctggcgctgatggacgccggcgtgccgatgaaggcg
ccggtggcgggcatcgccatgggcctggtgaaggatgacgacggctttgccgtgctcacc
gacatcctgggcgacgaggaccacctcggcgacatggacttcaaggtggccggcaccagc
gagggcgtcaccgccctgcagatggacatcaagatcgagggcatcaacgaggagatcatg
gagcaggcgctccagcaggccctggaggcccgcctgagcatcctcgagcagatgaacgcc
gtgatcggccagagccgcgccgaggtctccgagaatgcgccctccatggccaccatcaag
atcgacccggagaagatccgcgacgtcatcggcaagggcggctccaccatccgcaagatc
tgcgaggataccggcgcctccattgatctggacgacgacggcaccgtgcgcatctacgcc
gaggacaagaaggcggccaaggcggccatcgacaccgtcctggcgatcaccgccgaggcg
gagatcggcaagctctaccgcggcaaggtggtacgcatcgccgacttcggcgccttcgtc
aacatcatgccgggcaccgacggcctggtgcacatctcccagatcgtgccggagcgggtc
aacgacgtgcgtgacttcctcaacgagggtgacgaggtggtggtcaaggtgctcgacatc
gacaaccgcaaccgggtgaagctcaccatcaaggagatcaccccggaagagaaggcggcc
ttcgaggccgaggcagccgccgagcccgtgctctaa
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