Halomonas alkalicola: B6N23_09290
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Entry
B6N23_09290 CDS
T09267
Symbol
ybiO
Name
(GenBank) mechanosensitive channel protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
halw
Halomonas alkalicola
Brite
KEGG Orthology (KO) [BR:
halw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
halw02000
]
B6N23_09290 (ybiO)
Transporters [BR:
halw02000
]
Other transporters
Pores ion channels [TC:
1
]
B6N23_09290 (ybiO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Flagellin_IN
Motif
Other DBs
NCBI-ProteinID:
WLI72010
LinkDB
All DBs
Position
1947089..1949398
Genome browser
AA seq
769 aa
AA seq
DB search
MNPMRALPLMLGWLLIALLALAGPAQAQPAAPDGQPSANAALADLLENEQSRQQLIDQLR
GAADAAAVEPPPEQAQLSLPRQLAEITSHVASDIGSQFTAIVGAIGGMFDSDLESTFDVE
AFTSAAINLGLVILATFVLFMAFRRLARPLFTGVSQWSQSGEGLTPVLRLVICVALAAVV
DVLIVAFAYLGGNLIATFAIGETGELSTRASLFLNAFLVIELLKAAVRMLFASRYEGLRL
LPISAEEASYWNRWIARLIGLVGYGLMVVVPLVNAYVSPAVGQGLGTLIMVGAFLYAVIV
VLKNRRRLRDAINAKAAQTTMTASRISLQLFARTWHLFALAYFVMVLTVTLTRPVDALPF
VLFATLKTIAAVVVGLLVSSFLTQTIGRRIRLSDDLRLKLPLLEPRLNSYVPNALRLIRT
VIVVLVIMLVLDAWGAFDLAAWYASEAGSGLVGKLVSVAMILVIAIGAWLGLASLIEHKL
NPETGTGEPDARAKTLLTLFRNALAIALITMTAMIVLAEIGINIGPLIAGAGVLGLAIGF
GAQKLVQDIITGIFIQVENAMNTGDVVTVGGITGTAERLSIRSVGIRDVNGTYHIVPFSS
VDTVSNYMREFGYHVGEYGIAYRESIDDAIVALREAFDELAAGDDHKMNILAPLEVAGVT
ALADSSVNIRVRIKTTPGNQWAVGRAYNRLVKLHFDGKGIETPFPHTTLYFGVGKEGEAP
PANLRIMQQNYDIDGRPGGQPRSGESSRAGEEDPRSKPNPEFKGDFDED
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcccatgcgagccctacccctgatgctcggctggctgctgatcgccctgctggcg
ctcgccgggccggcgcaggcccagcccgccgcaccggacggccaaccctcggccaatgcc
gccctggccgacctgctcgagaacgagcagagccgccagcagctgatcgaccagctgcgc
ggcgccgccgatgccgcggccgtcgagccgccgccggagcaggcccagctatccctcccc
cgccagctggccgagatcaccagccacgtggccagcgatatcggcagccagttcacggcc
atcgtcggtgccatcggcggcatgttcgacagcgacctggagagcaccttcgacgtggag
gccttcaccagcgccgccatcaacctgggcctggtgattcttgccaccttcgtgctgttc
atggccttccgccgcctggcccggcccctgttcaccggcgtcagccagtggtcacagagc
ggcgaggggctgacgccggtgctacgcctggtgatctgcgtggcgctggccgcggtggtc
gatgtgctgatcgtcgccttcgcctacctgggcggcaacctgatcgccaccttcgccatc
ggcgagaccggcgagctctccacccgcgcctcgctcttcctcaacgccttcctggtgatc
gaactgctcaaggcggcggtgcgcatgctgttcgcctctcgctacgaggggcttcgcctg
ctgccgatctccgcggaagaggcctcctactggaaccgctggatcgcccgcctgatcggc
ctggtgggctacggcctgatggtggtggtgcccctggtcaacgcctatgtctcgccggcc
gtgggccagggcctgggcaccctgatcatggtgggggccttcctctacgcggtgatcgtg
gtgctcaagaaccgccggcgcctgcgcgatgccatcaacgccaaggcggcgcagaccacc
atgaccgccagccgcatctcgctgcagctctttgcgcgcacctggcacctcttcgccctg
gcctacttcgtcatggtgctgacggtgaccctgacgcgcccggtggacgccctgcccttc
gtgctcttcgccaccctgaagaccatcgccgccgtggtggtgggcctgctggtctccagc
ttcctgacccagaccatcggccggcgcatccggctctccgatgacctgcgtctcaagctg
ccgctgctggagccgcgcctcaacagctatgtgcccaacgccctgcggctgatccgcacc
gtcatcgtggtgctggtgatcatgctggtgctggacgcctggggcgccttcgacctggcc
gcctggtacgcctccgaggcgggcagcggcctggtcggcaagctggtcagcgtggcgatg
atcctggtgatcgccattggcgcctggcttggcctggccagcctgatcgagcacaagctc
aaccccgagaccggcaccggcgagcccgatgcccgcgccaagaccctgctgacactgttc
cgcaacgccctggccatcgccctgatcaccatgacggcgatgatcgtgctggccgagatc
ggcatcaatatcggtccgctgatcgccggtgccggtgtgctgggcctggccatcggcttc
ggcgcccagaagctggtccaggacatcatcaccggcatcttcatccaggtggagaacgcc
atgaacaccggtgacgtggtgaccgtgggcggcatcaccggcaccgccgagcgcctgagc
atccgctcggtgggcatccgcgacgtcaacggcacctaccacatcgtgcccttctccagc
gtggacaccgtctccaactacatgcgcgagttcggctaccacgtgggcgagtacggcatc
gcctaccgcgagagcatcgacgacgccatcgtggcgctgcgcgaggccttcgacgagctg
gcggccggcgacgaccacaagatgaacatcctcgccccgctggaggtggccggcgtcacc
gccctggcggacagctcggtgaacatccgcgtgcgcatcaagaccaccccgggcaaccag
tgggccgtggggcgcgcctacaaccgcctggtcaagctgcacttcgacggcaagggcatc
gagacccccttcccccacaccaccctctacttcggcgtgggcaaggagggcgaggcgcct
cccgccaacctgcgcatcatgcagcagaactacgacatcgacgggcgccccggcggccag
ccccgctccggcgagagcagccgcgcgggcgaggaggacccgcgctcgaagcccaacccc
gagttcaagggggacttcgacgaggactga
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