Halomonas alkalicola: B6N23_09330
Help
Entry
B6N23_09330 CDS
T09267
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
halw
Halomonas alkalicola
Pathway
halw00300
Lysine biosynthesis
halw00470
D-Amino acid metabolism
halw01100
Metabolic pathways
halw01110
Biosynthesis of secondary metabolites
halw01120
Microbial metabolism in diverse environments
halw01230
Biosynthesis of amino acids
Module
halw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
halw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
B6N23_09330 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
B6N23_09330 (dapF)
Enzymes [BR:
halw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
B6N23_09330 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Draxin
Motif
Other DBs
NCBI-ProteinID:
WLI72018
UniProt:
A0ABY9H168
LinkDB
All DBs
Position
1957302..1958135
Genome browser
AA seq
277 aa
AA seq
DB search
MLLHFTKMHGLGNDFMVLDLVTQRARLQDDQIRRLADRRFGVGFDQLLIVEPPRDPDMDF
RYRIFNADGSEVENCGNGARCFARFVRDQRLTHKHEIHVETAGGPLVLLVEDDGRVRVDM
GEPRFAPEALPFDAAEDRPLHLLAVDGERVEIGVVSMGNPHAVLRVEDVDRAPVARLGPA
IESHPRFPKRVNAGFMQVVSPHEIRLRVFERGSGETLACGTGACAAVASGIRQGLLESPV
TVHLPGGDLSIEWGGPGTSLAMSGPAERVYDGRIILN
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcacttcaccaagatgcacgggctgggcaacgacttcatggtgctcgacctg
gtcacgcagcgggcgcgcctgcaggacgaccagatccgccgcctggccgaccgccgtttc
ggcgtcggcttcgaccagctgctgatcgtcgagccgccccgggacccggacatggacttc
cgctaccggatcttcaacgccgacggcagcgaggtggagaactgcggcaacggggcgcgc
tgcttcgcgcgcttcgtgcgcgaccagcgcctgacccacaagcacgagatccacgtggag
accgccgggggcccgctggtgctgctggtggaggacgacggccgggtgcgggtcgacatg
ggcgagccgcgcttcgcccccgaggccctgcccttcgacgccgccgaggatcgcccgctg
cacctcctggcggtggacggcgagcgcgtcgagatcggcgtcgtctccatgggcaacccc
cacgcggtgctgcgggtcgaggacgtcgaccgcgccccggtggcgcgcctgggcccggcc
atcgagtcccacccgcgctttccgaagcgggtcaacgcgggcttcatgcaggtcgtttcc
ccccatgagatccgcctgagggtctttgaacggggcagcggcgagaccctggcctgcggc
accggcgcctgcgccgcggtggccagcggcatccgccaggggctgctcgaaagcccggtc
accgtgcacctccccgggggcgacctgagcatcgaatggggaggccccggcacctccctg
gccatgagcggccccgccgaacgcgtctatgacggccgcatcatcctgaactga
DBGET
integrated database retrieval system