Halomonas alkalicola: B6N23_09810
Help
Entry
B6N23_09810 CDS
T09267
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
halw
Halomonas alkalicola
Pathway
halw00541
Biosynthesis of various nucleotide sugars
halw01100
Metabolic pathways
halw01250
Biosynthesis of nucleotide sugars
Module
halw_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
halw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
B6N23_09810 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
halw01005
]
B6N23_09810 (rfaD)
Enzymes [BR:
halw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
B6N23_09810 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
halw01005
]
Core region
B6N23_09810 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
KR
Motif
Other DBs
NCBI-ProteinID:
WLI72098
LinkDB
All DBs
Position
complement(2046168..2047124)
Genome browser
AA seq
318 aa
AA seq
DB search
MIVVTGGAGFIGSNLVKALNERGRQDVMVVDDLSDGTKFVNLADCTLGDYLDKDDFRRRV
EAELRGEPAQLPEIEAIFHEGACSDTTEWDGRFMLDNNFEYSKVLLHFCQKRGIPFLYAS
SAATYGGSEVFVEAPEHEKPLNVYGYSKLLFDQYVRARWDEFESQVVGFRYFNVYGPREQ
HKGKMASVAYHHHTQIRGGDSVKLFGAWEGYEAGMQSRDFVYVGDVVSVNLWFLDNPQVS
GIFNLGSGRAEPFKAIGEAVIDYYGRGTIEYIDFPEELKGRYQSYTRADIGSLRRAGYDR
EFRTVAEGVGEYLEWLNG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtagtgacaggcggagccggcttcatcggctcgaatctggtgaaggcgctcaac
gagcgcggccgccaggatgtgatggtggtcgacgatctgtcggacggcaccaagttcgtc
aacctggccgactgcaccctcggcgactacctggacaaggacgacttccgtcgccgggtc
gaggcggagctgcgcggcgagccggcccagctgcccgagatcgaggcgatcttccacgag
ggggcctgctcggacaccaccgagtgggacggtcgcttcatgctcgacaacaacttcgag
tactccaaggtgctgctgcacttctgccagaagcgcggcatccccttcctctacgcctcc
tcggcggccacctacggcggcagcgaggtgttcgtggaggcgccggagcacgagaagccg
ctcaacgtctacggctactccaagctgctcttcgatcagtacgtgcgcgcccgctgggat
gagttcgagagccaggtggtgggctttcgctacttcaatgtctacggcccccgggagcag
cacaagggcaagatggccagcgtcgcctatcatcaccacacccagatccgcggcggcgac
agcgtcaagctgttcggtgcctgggagggctatgaggccggcatgcagagtcgcgacttc
gtctacgtgggcgatgtggtcagcgtgaacctgtggttcctcgacaatccccaggtgtcc
ggtatcttcaatctgggcagcggtcgcgccgagcctttcaaggcgatcggcgaggcggta
atcgactactacggccgcggcaccatcgagtacatcgactttcccgaagagctcaagggg
cgctaccagagctacacccgtgccgacatcggcagcctgcgccgggcgggctacgaccgc
gagtttcgcaccgtggccgagggggtcggcgagtacctggagtggctgaatggctga
DBGET
integrated database retrieval system
