Halomonas alkalicola: B6N23_10055
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Entry
B6N23_10055 CDS
T09267
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
halw
Halomonas alkalicola
Pathway
halw03420
Nucleotide excision repair
halw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
halw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B6N23_10055 (uvrD)
03430 Mismatch repair
B6N23_10055 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halw03400
]
B6N23_10055 (uvrD)
Enzymes [BR:
halw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B6N23_10055 (uvrD)
DNA repair and recombination proteins [BR:
halw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B6N23_10055 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
B6N23_10055 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_22
T2SSE
Motif
Other DBs
NCBI-ProteinID:
WLI72145
LinkDB
All DBs
Position
2099386..2101587
Genome browser
AA seq
733 aa
AA seq
DB search
MDDVTAILDHLNTAQREAVSAPQGNMLVLAGAGSGKTRVLVHRIAWLMQAEGLSPYAVLA
VTFTNKAAREMRTRLEALLGLSLRHVWVGTFHSTAHRLLRTHWQDARLPQHFQIIDSDDQ
LRLIKRLIKEHEIDDERFPPRQVQSFISGCKEEGLRPHQVDVHGDAYLGQMVELYERYQL
TCERGGLVDFGELLLRSLELLRDNPALLTHYQERFAHVLVDEFQDTNTLQYAWLKLLTGM
RTPMTVVGDDDQSIYGWRGARVENIRRFEQEFPETKTVRLEQNYRSTSAILEAANALISH
NTERMGKELWTDGARGEPISVYAGFNDLDESRFIVDTIREKVDEGFHRREIAILYRSNAQ
SRVIEETLIRQGVPYRIYGGHRFYERLEIKNALAYLRLLLNRDDDASLERVINVPARGIG
TRTVELLRTRARESGVSLWQALHDGLSDGTLKGRAGSVVQAFAELIERLDDETAGLALHE
IIDHVIERSGLVEHHRSEKGEKGQARVENLEELVNAARAFTQGESFDPPEAGEGAVALEA
FLSEAALNAGEHEADEFEDSVQLMTLHAAKGLEFPVVFMAGVEEGLFPHRMSAEEPGRLE
EERRLCYVGLTRAMKKLYLTHAEIRRLHGKETFQRASRFLRELPEQYLEEVRLRGQISRP
VTTSRPSGLRQTEVNGGADLPSLSLGQRVHHPVFGEGVILNAEGQGERARVHVSFEGEGD
KWLVLGFAKLTPL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtcacggcgatcctcgaccacctcaacaccgcccagcgcgaggcggtcagt
gccccccagggcaacatgctggtgctggccggtgccggctccggcaagacccgggtgctg
gtccaccgcatcgcctggctgatgcaggccgaggggctctccccctatgccgtgctcgcc
gtgacctttaccaacaaggcggcccgcgagatgcgcacccgcctggaggcgctgctcggg
ctctccctgcgccacgtctgggtgggcaccttccactccacggcccaccgcctgctgcgc
acccactggcaggatgcccggctgccccagcacttccagatcatcgattccgatgaccag
ctgcgcctgatcaagcggctgatcaaggagcacgagatcgatgacgagcgcttcccgccg
cgccaggtgcagagcttcatctcgggctgcaaggaggaagggctgcgcccccaccaggtc
gacgtccatggcgacgcctacctggggcagatggtggagctctacgagcgttaccagctc
acctgcgagcgcggcggcctggtggacttcggcgagctcctgctgcgcagcctcgaactc
ctgcgcgacaaccccgccctgctgacccactaccaggagcgcttcgcccacgtgctggtg
gatgagttccaggacaccaacaccctgcagtacgcctggctgaagctgctcaccggcatg
cgcacgccgatgaccgttgtgggcgacgacgaccagtccatctacggctggcgcggcgcc
cgggtggagaacatccgccgcttcgagcaggagttcccggagacgaagacggtgcgcctg
gagcagaactaccgctccaccagcgccatcctcgaggccgccaacgccctgatcagccac
aacaccgagcgcatgggcaaggagctgtggaccgacggcgcccgcggcgagcccatctcc
gtctatgcgggcttcaacgacctggacgagtcccgcttcatcgtcgacaccatccgcgag
aaggtcgacgagggcttccatcgccgcgagatcgccatcctctaccgctccaacgcccag
tcccgggtgatcgaggagaccctgatccgccagggcgtgccctaccgcatctacggcggg
caccgcttctacgagcgcctggagatcaagaacgccctggcctacctgcgcctgctgctc
aaccgcgacgacgacgcctccctggagcgggtgatcaacgtgccggcccggggcatcggc
acccgcaccgtggagcttctgcgcacccgggcccgggagagcggcgtctcgctgtggcag
gcgctgcatgacggactgagcgacggcaccctcaaggggcgtgccggcagcgtcgtgcag
gccttcgccgagctgatcgagcggctcgacgacgagaccgcggggctggcgctgcacgag
atcatcgatcacgtcatcgagcgctcggggctggtcgagcaccaccgcagcgagaagggc
gagaaggggcaggcccgggtcgagaatctggaggagctggtcaacgccgcccgcgccttc
acccagggcgagtccttcgatccccccgaggccggcgagggagccgtggcgctggaggcc
ttcctctccgaggcggcgctgaatgccggcgagcacgaggccgacgagttcgaggacagc
gtccagctgatgaccctgcacgccgccaaggggctggagttcccggtggtcttcatggcc
ggcgtggaggaggggctcttcccccaccgcatgtcggcggaggagccggggcgcctggag
gaggagcgccggctctgctacgtgggcctgacccgcgccatgaagaagctctacctgacc
cacgccgagatccgccgcctgcacggcaaggagaccttccagcgggcctcgcgcttcctg
cgcgagctccccgagcagtacctggaggaggtgcgcctgcgcggccagatcagccggccg
gtaacgacctcgcgcccctcggggctgcgccagaccgaggtgaatggcggcgccgacctg
ccgagtctctcgctgggccagcgggtccaccacccggtgttcggcgagggggtgatcctc
aacgccgaggggcagggcgagcgcgcccgggtgcatgtcagcttcgagggcgagggcgac
aagtggctggtgctgggcttcgccaagctgacgccgctctga
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