Halomonas alkalicola: B6N23_11690
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Entry
B6N23_11690 CDS
T09267
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
halw
Halomonas alkalicola
Pathway
halw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
halw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B6N23_11690 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halw03021
]
B6N23_11690 (rpoA)
03400 DNA repair and recombination proteins [BR:
halw03400
]
B6N23_11690 (rpoA)
Enzymes [BR:
halw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B6N23_11690 (rpoA)
Transcription machinery [BR:
halw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B6N23_11690 (rpoA)
DNA repair and recombination proteins [BR:
halw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B6N23_11690 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Acyl-CoA-dh_C
Motif
Other DBs
NCBI-ProteinID:
WLI72442
UniProt:
A0ABY9H1U5
LinkDB
All DBs
Position
2453733..2454731
Genome browser
AA seq
332 aa
AA seq
DB search
MQRSVTEFLRPRDIKVEEISAHHAKIVLEPFERGFGHTLGNALRRILLSSMPGCAVVEVE
IGGVDHEYSAIEGVQEDVIEILLNLKDVAIKMHSRDEAVLSLNKQGPAVVTAGDIALDHD
VEIVNPEHVIAHVNEGAELKMQLKVARGRGYEPADARIGADDESRAIGRLQLDATFSPVR
RVSYSVEAARVEQRTDLDKLIISLETDGTLDPEEAIRRSATILQDQLAAFVDLEADKEQE
VEEEEDHIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLN
EIKDVLAARGLSLGMRLENWPPASLKDDKASA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtgaccgagtttcttcgcccgcgcgacatcaaggtcgaagagatcagc
gcacatcacgcgaagatcgtgctcgagcccttcgagcgtggcttcggccacaccctgggc
aacgcactgcgtcgtatcctgctctcgtccatgcccggctgcgccgtggtggaagtcgag
atcggcggtgtcgatcacgagtacagcgcgatcgaaggggtccaggaagatgtcatcgag
atcctcctgaacctcaaggacgtggcgatcaagatgcacagccgcgatgaggcggtgctc
tcgctgaacaagcagggcccggccgtcgtcaccgcgggtgacatcgccctcgaccacgac
gtcgagatcgtcaatcccgagcacgtcatcgcccacgtcaacgagggcgccgagctgaag
atgcagctcaaggtggcacgcggccgcggctatgagccggcggacgctcgcatcggggca
gacgacgagtctcgtgccatcggccgcctgcagctggatgcgaccttcagccccgtgcgt
cgggtctcctacagcgtcgaggccgcgcgtgtcgaacagcgcaccgacctcgacaagctg
atcatcagcctggagaccgacggcaccctggatcccgaagaggcgatccgtcgcagcgcg
accatcctgcaggatcagctggccgcgttcgtcgacctggaagccgacaaggaacaggaa
gtggaggaggaggaggatcacatcgatccgatcctgctgcgccccgtagacgatctcgag
ttgaccgttcgcagcgccaactgcctgaaggccgagaacatttattacatcggcgatctg
atccagcgcaccgaggtggagctgctgaagacgccgaacctcggcaagaagtccctgaac
gagatcaaggacgttctggcagcgcgcggtctttccctgggcatgcggctggaaaactgg
ccgccggctagcctgaaggacgacaaggcctccgcgtga
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