Halomonas alkalicola: B6N23_13265
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Entry
B6N23_13265 CDS
T09267
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
halw
Halomonas alkalicola
Pathway
halw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
halw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B6N23_13265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halw03000
]
B6N23_13265
Transcription factors [BR:
halw03000
]
Prokaryotic type
Helix-turn-helix
Other families
B6N23_13265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
GAF_3
AAA_5
Mg_chelatase
AAA
AAA_2
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WLI72717
LinkDB
All DBs
Position
2796533..2798212
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AA seq
559 aa
AA seq
DB search
MERECETETGRVSRQRSGRRAEEPDSERSPAFWRAQEMLLLQQVMALAGRKTDPGPALQE
MLHLLSELLGLNRGRIVLLDAAGRHGEIRYAYGLTREEVSRGRYGLHEGITGRVLATGQL
MVCQNIDRDPLFLGRMVARSRLPEGPVSFIAQPIRVAERTLGVLACHRIRRRPRPLADDL
QMLKLLAAYAGQLLQLHAQMQARTESLRQQNRLLSRALASSASRYGIVGSSPRLLQAVTE
LEQVSDSTASVLLLGESGTGKELFARALHLASPRREAPFIKVNCAAIPETLFESELFGYE
KGAFTGAQSLRQGSFEQADGGTLFLDEIGELPLAMQTKLLRTLQEGSITRLGGKSELAID
VRLVAATNRHLEEEVARGAFRQDLYYRLNVIPIRLPSLAERSGDIPALALHHLNRINQAN
QRNVHLTGGALERLQAYPWPGNIRELGNVIERMVLLTDRAALEAEDVERFLPGEQEMAAG
APGGGAAGGPLPGEGGGPFPGATATVADVRPYVPATSHSPEALCHALRRSGGNKTRAAQL
LGLTPRQFSYRWNKLGLAD
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggagagggagtgcgagacggagacaggccgggtttcgcggcagcggagcggacgccgg
gccgaggagcccgacagcgagcgctctcccgccttctggcgggcccaggagatgctgctg
ctgcagcaggtgatggcgctggcggggcgcaagacggacccggggccggcgctccaggag
atgctgcacctgctgtcggagctgctgggactcaaccgggggcggatcgtgctgctggac
gcggcgggccgccacggcgagatccgctacgcctacgggctgacccgggaggaggtctcc
cggggccgctacgggctccacgaggggatcaccggccgggtgctggccaccggccagctg
atggtctgccagaatatcgaccgcgacccgctcttcctggggcggatggtggcgcgcagc
cggctgccggagggcccggtctccttcatcgcccagccgatccgggtggccgagcgcacc
ctgggggtgctggcctgccaccggatacggcgccgcccgcgccccctggcggatgacctg
cagatgctcaagctgctggcggcctatgccggccagctgctgcagctgcacgcccagatg
caggcgcgcaccgaatctctccggcagcagaatcggctgctctcccgggcgctggcctcc
agcgccagccgctacggcatcgtcggcagctccccgcggctgctccaggcggtgacggag
ctcgagcaggtctccgactccaccgccagcgtgctgctgctgggggagtcgggcaccggc
aaggagctcttcgcccgggccctgcacctggccagcccgcggcgggaggcgcccttcatc
aaggtcaactgcgcggcgattccggagaccctgttcgagtccgagctcttcggctacgag
aagggcgccttcaccggcgcccagtcgctgcgccagggctccttcgagcaggccgacggc
ggcaccctctttctcgacgagatcggcgaactgcccctggccatgcagaccaagctgctg
cgcaccctgcaggaggggtcgatcacccggctgggcggtaagagtgaactcgccatcgac
gtgcgtctggtggcggccaccaaccgccacctcgaggaggaggtggcccggggcgccttc
cgccaggacctctactaccggctcaacgtcatcccgatccggcttccctccctggccgag
cgcagcggcgatatcccggccctggcgctgcaccacctcaaccggatcaaccaggccaac
cagcgcaacgtccacctcaccggcggggcgctggagcgcctgcaggcctacccctggccg
ggcaatatccgcgagctgggcaacgtgatcgagcgcatggtgctgctgaccgatcgggcg
gccctggaggcggaggacgtggagcgcttcctccccggggagcaggagatggcggccggg
gcgccggggggtggtgccgcgggcgggccgctgccgggggagggcgggggcccctttccg
ggcgccaccgcgacggtcgccgacgtacgcccctatgtgccggctacctcccacagcccc
gaggcgctctgccacgccctgcggcgcagcgggggcaacaagacccgtgccgcccagctg
ctggggctgacgcctcgccagttcagctaccgctggaacaagctggggctcgccgactag
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integrated database retrieval system
