Halomonas alkalicola: B6N23_14060
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Entry
B6N23_14060 CDS
T09267
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
halw
Halomonas alkalicola
Brite
KEGG Orthology (KO) [BR:
halw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halw03016
]
B6N23_14060
Enzymes [BR:
halw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
B6N23_14060
Transfer RNA biogenesis [BR:
halw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B6N23_14060
Prokaryotic type
B6N23_14060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WLI72867
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All DBs
Position
2987658..2988734
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AA seq
358 aa
AA seq
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MSDTDARREPDAIAWPPSWPRVLDADFGPPPAGEYRATPEDFQVAEVLDFAPEGQGEHLW
LHVEKRDLTTAMAVRELARLCEVSPRDVGYSGMKDRVAVTRQWLSVQLPGREAPTGLAEA
LAERGIRVLAEARHPRKLKRGVHRANRFRLRITGPAVADPTLEARWARLVEQGVANYFGP
QRFGPDGRNLQRARSLLARGWRKRDDRDGMMLSAARSFLFNEQLAERVHDGSWHRLLPGE
VAILDGTASQFTLETPDAELEARAARLDLHGSGVLWGVGGSVAAGEALDREARLAERYPA
LCAGLERAGVRLARRALRLRLGEPTLTRGEGELWLAFSLPRGAFATAVLRELIAHPTL
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgacaccgacgcccggcgcgagccggatgccatcgcctggccgccgagctggccg
cgggtgctcgacgccgacttcggcccgccgccggcgggggagtatcgcgccacccccgag
gatttccaggtcgccgaggtgctcgacttcgccccggaggggcagggcgagcacctctgg
ctgcacgtcgagaagcgcgacctgaccaccgccatggcggtgcgcgagctggcccggctg
tgcgaggtctcgccccgcgacgtcggctactccggcatgaaggatcgcgtcgccgtcacc
cgtcagtggctctcggtgcagctgcccgggcgcgaggccccgacagggctcgccgaggcg
ctggccgagcgcggcatccgcgtgctggccgaggcgcgccatccccgcaagctcaagcgc
ggcgtgcaccgcgccaatcgctttcgcctgcggatcaccggccccgcggtggccgaccct
accctcgaggcgcgctgggcgcggctggtggagcagggcgtggccaactatttcgggccc
cagcgcttcgggccggatggccgcaacctgcagcgtgcccgctcgctgctggcccgcggc
tggcgcaagcgcgatgaccgcgacggcatgatgctctccgcggcgcgcagcttcctgttc
aacgagcagctggccgagcgcgtccacgacggcagctggcaccgcctgctgcccggcgag
gtggcgatcctcgacggcaccgccagccagttcaccctggagacgccggatgccgagctc
gaggctcgggcggcccggctcgacctgcacggaagcggcgtgctgtggggcgtcggcggc
tccgtggcggccggcgaggcgctggaccgggaggcccggctggccgagcgctacccggcg
ctctgcgcgggcctcgagcgcgccggcgtgcgcctggcgcgacgcgcgctgcgcctgcgc
ctcggcgagccgaccctgacccgcggcgagggcgagctgtggctcgccttcagcctgccg
cgaggcgccttcgccaccgccgtgctgcgcgagctgatcgcccaccccaccctgtga
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