Halomonas alkalicola: B6N23_14550
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Entry
B6N23_14550 CDS
T09267
Name
(GenBank) DEAD/DEAH box helicase
Organism
halw
Halomonas alkalicola
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
SWIM
Suv3_C_1
Motif
Other DBs
NCBI-ProteinID:
WLI72959
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Position
3087760..3091299
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AA seq
1179 aa
AA seq
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MSEHFPEDPALDLFWALMEVDWPTAFDAATLSRGLGYAQKGRVYEGLNLQVGSDMLGIFG
RVAGGRKQAYMTQVYLDPKGLDKGLFTLCNCPVGVRCKHAVALIETFMEQVAEEGGTWQE
DSPEPAPGSPAESPIANSSSPAELASARSERLKRDWEAWLAAPAHPGPDSERVGEEYRLA
LFLSIPGAYRDPILRVVPVWVRPSRQSRRHTGWVAPRIIESGSHGLQPVPEGGWSADLEE
ALTLLLHGQRESTWVSGQVRGATLVSQAFQARALWRLLEAEAPPLLFHEKQTGSPLALGP
AGQLAPYWQADEEGVQHLELDVQPADLLSPAGIVLRAGRELCYLDVEQGLFGRMAGDPEW
LSRVARAPPLPPEMSGWLSERLREAPALAETLVAPHQIEERHLDDVVPRLKVTMQAAAGQ
LGFRDGAPLPRWVEGGAAVVSFDYAGIEVAPERGERVQGFRDGQRLIIRRDTEAELALVR
SLPPGMVTLERLRELGVVPAYLKLPSWSLLLPVAGCLPATVLEWSTHLAGPDDWWEMIAR
LRQAGCLVEFDHDFPEEPTYLEPDDWYGELEPAGNGWFDLALDIEVEGERLNLLPILRRL
FRDPGFPLEPAEDEAEDASWTLPLAENRRLVMPLSRLRSLMAPILDWLSDESDPEAALRL
PVTAAEKVAPLAEHERWAGREDVTALASRLRALPASLPAPPGFTGELRDYQARGIAWMRF
LSELGTGGILADDMGLGKTVQVLAHVLDERARGALTRPTLVVAPTSLVGNWCAEAERFAP
DLNVVALQGGKAQRERQFEEALPNADLAVTTYALLIRDLERLREHDFGLLVLDEAQAIKN
AASQTARAVRELNVARAIAMTGTPLENHLGELWAQLDAVAPGALGSQQWFGQRFRTPIEK
EGDVELRQRLSRRIAPLMLRRTKQQVLAELPEKTETRREVTLSGAQRELYESLRLAQHQR
VQQAVAERGLAGSGIVMLDALLKLRQVCCDPRLVKLQSARKTKRSAKLQQLRELVGPLVE
EGRRILIFSQFTEMLTLIGEALEKDGITFTTLTGDTPGKTRTQRVALFQQGEIPVFLISL
KAGGTGLNLTAADTVIHYDPWWNPAVEAQATGRAHRMGQQNPVFVYKLVCAGTVEERILD
LQARKADLAASILEGGAERPSEGPMFDEEDLALLFAPVV
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggagcacttccctgaagatcctgcccttgacctgttctgggccctgatggaggtg
gactggcccaccgccttcgatgccgccacgctgtcacgtggcctgggctatgcccagaag
gggcgtgtgtacgaagggctcaacctgcaggtcggcagcgacatgctgggaatcttcggg
cgcgtggctgggggccgcaagcaggcctacatgacgcaggtctatcttgatcccaagggg
ctcgacaaggggctctttaccctctgcaactgcccggtcggcgtgcgctgcaagcatgcc
gtggctctgatcgagaccttcatggagcaggtggccgaggagggtggcacctggcaggag
gacagccccgagcctgctcccggctcgcccgctgaatcgccgatcgccaactcgtcgtcg
cctgccgagctggcatctgccagaagcgagcggctgaagcgcgactgggaggcttggctg
gccgccccggctcacccaggccctgacagcgagcgcgttggcgaggagtatcgcctggcg
ctgtttctgagcatccccggtgcctatcgtgacccgatactgcgggtagtgccggtgtgg
gtgcgcccgtcgcgtcagagccggcgtcatacgggctgggtagcgccgcggatcatcgaa
tctggctcccatggtttgcagccggttcccgaaggcggctggtcggccgatcttgaggaa
gccctgaccctgctgttgcacggccaacgagagtccacctgggtgtccggccaggtgcgc
ggcgccaccctggtgtcgcaggccttccaggcccgggcgctgtggcgcctgctggaagct
gaggctcccccgctgctgttccacgagaagcagaccggctcgccgctggcgctggggcct
gccgggcagttggcaccttactggcaagccgatgaggagggtgtccagcaccttgagctg
gacgtccagcccgctgacctgctctctccagcggggatcgtgctgcgcgcagggcgcgag
ctgtgttacctggacgttgagcagggcctcttcgggcgcatggcgggagacccggaatgg
ctcagccgggtcgcgcgggcgccgccattgccccctgagatgagcggctggttgagtgag
cgactgcgcgaggcaccggcgctggccgagaccctggtcgcgccgcaccagatcgaggag
cgccacctggatgatgtggtgccgcggctcaaggtcaccatgcaggctgccgcggggcag
ctgggctttcgtgatggggccccgctgccgcgctgggtcgaggggggggccgcggtggtg
agtttcgactacgccggcatcgaggtggcgcctgagcgtggcgagcgcgtgcagggcttt
cgcgacggccagcgcctgatcatccggcgcgataccgaggcggagctggcgctggtgcgc
agcctgccgccgggcatggtcaccctggagcgactacgcgaacttggcgtggtgccggcc
tatctgaagctgcccagctggtcgctgctgctgccggtcgcgggatgcctgccggccacg
gtcctggagtggtcgactcacctggccggccccgatgactggtgggagatgattgcccgg
ctgcgccaggccggttgcctggttgagttcgatcatgacttccccgaagagccgacgtac
ctggagccggacgactggtacggcgagcttgagccggccggcaacggctggttcgacctg
gcgctggatatcgaagtggaaggcgagcgcctcaacttgctgccgatcctgcgtcgcctg
tttcgggatcccggcttcccgctggagcccgccgaggacgaagccgaggatgccagctgg
acgctgcccctggcggagaatcggcgcctggtgatgccgctctcgcgcctgcgctcgctg
atggcgcctatcctggattggctcagcgacgagagtgacccggaggctgcgctgcgttta
ccggtgaccgccgccgagaaggtcgcgccgcttgccgaacacgagcgctgggcggggcga
gaagacgtgactgccctggccagccgcctgcgcgcactgcccgccagcctgccggctccc
ccaggctttaccggggagctgcgcgactaccaggcccgcggcatcgcctggatgcgcttt
ctctccgagctgggcaccggcggcatcctggccgacgacatgggcctgggcaagaccgtc
caggtattggcgcatgtgctcgatgagcgcgcccgcggggcgctgacccgcccgaccctg
gtggtggcgcccaccagcctggtgggcaactggtgcgccgaggctgaacgcttcgccccc
gatctcaacgtcgtcgccctgcaggggggtaaggctcagcgcgagcgccagttcgaggag
gcgcttcccaatgccgacctcgcggtgaccacctatgcgttgctgatccgcgatctcgag
cgcctgcgcgagcacgacttcggcctgctggtgctggacgaggcccaggcgatcaagaac
gccgccagccagaccgcgcgggcggtgcgcgagctcaatgtggcccgcgccatcgccatg
accggcacccctttggagaaccacctcggtgagctgtgggcccagctcgacgctgtggct
cccggtgccttgggcagccagcagtggttcggtcagcgctttcgcacccccatcgagaaa
gagggcgacgttgaactgcgccagcggctctcccggcgcatcgcgccgctgatgctgcgc
cggaccaagcagcaggtgctcgccgagctgccggagaagaccgagacccgccgcgaggtc
accctgagcggcgcccagcgcgagctctacgagagcctgcgcctggcccagcaccagcgg
gtgcagcaggcggtggccgagcgcggactggccggttccggcatcgtgatgctcgatgcg
ctgctcaagctgcgccaggtgtgctgcgacccgcggctggtcaagcttcagagcgcgcgc
aagacgaaacgctcggccaagctccaacagctgcgcgagctggtgggacccttggtggag
gaggggaggcgcatcctgatcttctcccagttcaccgagatgctcacgctgatcggtgag
gccctggagaaggacggcatcaccttcaccaccctgaccggcgacacgccgggcaagacc
cgcacccagcgggtggcgctgtttcagcagggcgagatcccggtgttcctgatcagcctc
aaggccggcggtacgggcctgaacctcaccgccgcggataccgtaatccactacgatccc
tggtggaatccggcggtggaggcccaggccaccggccgtgcccaccgcatgggtcagcag
aacccggtgttcgtctacaagctggtgtgcgccggcaccgtggaggagcgcattctcgac
ctgcaggcacgcaaggctgacctcgccgcctcgatcctagagggcggtgccgagcgcccg
agtgagggcccgatgttcgacgaagaggacctggcgctgctctttgccccggtcgtctag
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