Halomonas alkalicola: B6N23_15355
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Entry
B6N23_15355 CDS
T09267
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
halw
Halomonas alkalicola
Pathway
halw00071
Fatty acid degradation
halw00280
Valine, leucine and isoleucine degradation
halw00310
Lysine degradation
halw00362
Benzoate degradation
halw00380
Tryptophan metabolism
halw00410
beta-Alanine metabolism
halw00640
Propanoate metabolism
halw00650
Butanoate metabolism
halw00907
Pinene, camphor and geraniol degradation
halw00930
Caprolactam degradation
halw01100
Metabolic pathways
halw01110
Biosynthesis of secondary metabolites
halw01120
Microbial metabolism in diverse environments
halw01200
Carbon metabolism
halw01212
Fatty acid metabolism
Module
halw_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
halw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
B6N23_15355 (fadB)
00650 Butanoate metabolism
B6N23_15355 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
B6N23_15355 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
B6N23_15355 (fadB)
00310 Lysine degradation
B6N23_15355 (fadB)
00380 Tryptophan metabolism
B6N23_15355 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
B6N23_15355 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
B6N23_15355 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
B6N23_15355 (fadB)
00930 Caprolactam degradation
B6N23_15355 (fadB)
Enzymes [BR:
halw01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
B6N23_15355 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
B6N23_15355 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
B6N23_15355 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
B6N23_15355 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WLI73101
LinkDB
All DBs
Position
3267251..3269428
Genome browser
AA seq
725 aa
AA seq
DB search
MIYQGNAITVTRGGDDIATLTFDLQGESVNKLSSAVIAELEQAVKAIQAESGLAGLVLAS
AKEAFIVGADITEFQAMFGKGGEFLESMLHRVHGIFNAIEDLPFPTVTAINGLALGGGCE
VLLTTDFRVMGDKAQIGLPETKLGILPGWGGCVRLPRLIGADNAIEWIAGGTQNRADAAL
KVGAVDAVVPGEQLEAAALDILARANAGELDYRARREEKMQPLRLGPIEQMMAFETAKGY
VAGKAGPHYPAPVEAIKVIQKGAGEERARAQAIEAKAFAKLAMTEVAFNLVGLFMSDQVV
KKKGGQFEKQARPVKQAAVLGAGIMGGGIAYQSASKGTPILMKDIKEEAIQLGLKEARKL
FTKQVERKKLTPEQMAEKLANIRPTLTYGDFGSVDLVVEAVVENPKVKGAVLTEVEGLVG
EETILASNTSTISITRLASSLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDAAVAATVA
YARAMGKTPIVVNDCPGFLVNRVLFPYFGGFSQLMAQGADFQRVDKVMEKFGWPMGPAYL
LDVVGMDTAVHAGEVMAEGFPERMGSLGGNGEKSAIQAMFENDRLGQKNDRGFYAYEEDR
KGKPKKVSDEAAIALVKSVAKESREFSDEEIISRMMVPLCLETVRCLEDGIVGTPAEADM
ALIYGIGFPPFRGGALRYVDAMGVAAFVKLADGLAEELGPLYAPTEKLREMAAAGETFYA
APAQA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcagggcaatgccatcacggtgacgcgcggcggcgacgatatcgccacgctc
accttcgacctgcagggcgagtcggtcaacaagctctccagcgcggtgatcgccgagctg
gagcaggcggtcaaggccattcaggccgagagcggcctggccggactggtgctggccagc
gccaaggaagccttcatcgtcggtgccgacatcaccgagttccaggccatgttcggcaag
ggcggcgagttcctcgagtcgatgctgcaccgggttcacggcatcttcaatgccatcgag
gacctcccctttcccaccgttaccgccatcaacggtctggccctgggcggcggctgcgaa
gtgctcctgaccaccgacttccgggtgatgggcgacaaggcccagatcggcctgcccgag
accaagctcggcatcctgcccgggtggggcggctgcgtgcgcctgccgcgcctgatcggc
gccgacaacgccatcgagtggatcgccggtggcacccagaaccgggccgatgccgctctc
aaggtgggggccgtggatgccgtggtgccgggtgagcagctcgaggctgccgcgctggac
attctcgcccgggccaacgccggcgagctggactaccgcgcgcgccgcgaggagaagatg
cagccgctcaggctcgggcccatcgagcagatgatggccttcgagaccgccaagggctac
gtggccggcaaggcgggcccccactacccggcgcccgtcgaagcgatcaaggtgatccag
aagggggccggggaggagcgcgctcgggcccaggccatcgaggccaaggccttcgccaag
ctggccatgaccgaggtggccttcaacctggtcggcctcttcatgagcgaccaggtggtc
aagaagaagggcggccagttcgagaagcaggcgcgcccggtcaagcaggccgccgtgctc
ggcgccggcatcatgggcggcggcatcgcctaccagagcgcctccaagggcaccccgatc
ctgatgaaggacatcaaggaggaggcgatccagctggggctcaaggaggcacgcaagctc
ttcaccaagcaggtggagcgcaagaagctgacccccgagcagatggcggagaagctggcc
aacatccgcccgacgctgacctatggtgacttcggcagcgtcgacctggtggtcgaggcg
gtggtcgagaaccccaaggtcaagggggcggtgctgaccgaggtcgagggactggtgggc
gaggagaccatcctggcctccaacacctccaccatctccatcacccgcctggcttcgagc
ctcaagcgtcccgaaaacttctgcggcatgcacttcttcaacccggtgcaccgcatgccg
ctggtggaggtgatccgcggcgagaagacctctgacgctgccgtggcggccaccgtggcc
tacgcccgcgccatgggcaagacccccatcgtggtcaacgactgcccgggctttctggtc
aaccgcgtgctcttcccctacttcggcggcttcagccagctgatggcgcagggcgccgac
ttccagcgggtcgacaaggtcatggagaagttcggctggcccatgggtcccgcctacctg
ctcgacgtggtgggcatggacaccgccgtgcacgccggcgaggtgatggccgagggcttc
ccggagcggatgggcagcctgggcggcaatggcgagaagagcgccatccaggcgatgttc
gagaacgaccgtctgggccagaagaacgacaggggcttctacgcctacgaggaggaccgc
aagggcaagccgaagaaggtcagcgacgaggccgccatcgccctggtcaagagcgtggcg
aaggagagccgcgagttctccgacgaggagatcatcagtcgcatgatggtgccgctctgc
ctggagaccgtgcgctgcctggaggacggcatcgtcggcacgcccgccgaggcggacatg
gcgctgatctacggtatcggcttccctccgttccgtggcggtgcgctgcgctatgtcgac
gccatgggcgtggcggccttcgtcaagctggccgatggcctcgccgaggagctggggccg
ctctacgcccccaccgagaagctgcgcgagatggccgctgccggcgagaccttctatgcc
gccccggcccaggcctga
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