Halomonas alkalicola: B6N23_16745
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Entry
B6N23_16745 CDS
T09267
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
halw
Halomonas alkalicola
Brite
KEGG Orthology (KO) [BR:
halw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halw03016
]
B6N23_16745 (truA)
Enzymes [BR:
halw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
B6N23_16745 (truA)
Transfer RNA biogenesis [BR:
halw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B6N23_16745 (truA)
Prokaryotic type
B6N23_16745 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
TetR_C_20
Motif
Other DBs
NCBI-ProteinID:
WLI73338
LinkDB
All DBs
Position
3562235..3563152
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AA seq
305 aa
AA seq
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MTLFQLLDDRTPLAGRLAMGVEYDGSAYCGWQYLKHSPSVQGALEQALGRVAGQPIRIHA
SGRTDSGVHATRQVIHFDPPVPRSQKAWVFGVNANLPRDVAVRWVKEVPESFHSRFKALA
RRYRYILLNQPSRPVLERANVTWCRDPLDAEAMHRAAQVLVGEHDFSSFRAAGCQSKTPW
RHLHFIEVHRHGPLVVVDVQGNAFLHHMIRNIVGALVTVGRGERGEEYLAELMALKDRTL
ADVTAPACGLHFVDSLYDESWGLPREPLGPNLLAFLGEWTGERPLPDCPMVEFRRGRPVA
AGEAP
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaccctctttcagcttctcgatgatcgcacccccctggccggccggctggccatgggg
gtcgagtacgacggcagcgcctactgcggctggcaatacctcaagcattcgccctccgtg
cagggggcgctggagcaggccctgggccgtgtggccggccagccgatccgcatccatgcc
agcggtcgcaccgactcaggcgtgcatgccacgcgccaggtcatccacttcgacccgccg
gtgccgcgctcccagaaggcctgggtgttcggcgtcaatgccaacctgccgcgggacgtc
gccgtgcgctgggtcaaggaggtgcccgagagcttccactcccgcttcaaggccctggcg
cgccgctatcgctacatcctgctcaaccagcccagccgcccggtgctggaacgcgccaac
gtcacctggtgtcgcgaccccctggacgccgaggccatgcaccgcgccgcccaggtgctg
gttggcgagcacgatttctccagcttccgggccgccggctgccagtcgaagaccccctgg
cgccatctgcacttcatcgaggtgcaccgccacggcccgctggtggtggtggacgtccag
ggcaacgccttcctgcaccacatgatccgcaacatcgtcggcgccctggtcaccgtgggg
cgcggcgagcgtggcgaggagtacctggccgagctgatggccctcaaggaccgcaccctg
gccgacgtcaccgcgcctgcctgcggcctgcacttcgtggactccctctacgacgagagc
tggggcctgccccgcgagccgctgggccccaacctgctcgccttcctcggcgagtggacc
ggcgagcggccgctgcccgactgtcccatggtggagtttcgccgcggccggccggtggcg
gccggggaggcgccatga
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