Halorussus limi: M0R89_01190
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Entry
M0R89_01190 CDS
T08097
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
halx
Halorussus limi
Pathway
halx04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
halx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
M0R89_01190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halx03019
]
M0R89_01190
03009 Ribosome biogenesis [BR:
halx03009
]
M0R89_01190
04131 Membrane trafficking [BR:
halx04131
]
M0R89_01190
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
halx04147
]
M0R89_01190
Messenger RNA biogenesis [BR:
halx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
M0R89_01190
Ribosome biogenesis [BR:
halx03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
M0R89_01190
Membrane trafficking [BR:
halx04131
]
SNARE
SNARE associated proteins
Others
M0R89_01190
Autophagy
Aggrephagy
Other aggrephagy associated proteins
M0R89_01190
Exosome [BR:
halx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
M0R89_01190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_2
AAA_16
TIP49
AAA_5
AAA_14
AAA_22
AAA_33
NPHP3_N
RNA_helicase
AAA_7
nSTAND3
Mg_chelatase
AAA_28
AAA_3
DUF815
NB-ARC
AAA_lid_PRS2_C
ABC_tran
IstB_IS21
Sigma54_activat
Parvo_NS1
AAA_17
AAA_30
AAA_11
TsaE
nSTAND_NTPase5
AAA_18
PhoH
AAA_24
bpMoxR
SLFN-g3_helicase
Zot
HJURP_C
Motif
Other DBs
NCBI-ProteinID:
UPV74700
UniProt:
A0A8U0HUK5
LinkDB
All DBs
Position
235358..237622
Genome browser
AA seq
754 aa
AA seq
DB search
MKLTVKPLKQKDAGRGLAAVDRQSMHELGVENGDYIVIEGKNQGRAVARVWPGYPEDEGR
SIVRIDGQLRQEAGVGIDDKVTIEKADVKPANSVTIALPQNLQIRGDITPHIRDKLSGQA
ITQGQNVPFGFGLMGMGSGQSIPLKVASTDPEGTVVVTDSTTINISERAAEEIAQGASGG
PEGTPSVTYEDIGGLEGELEQVREMIELPMRHPELFSRLGIDPPKGVLLHGPPGTGKTLM
AKAVANEIDAHFQTISGPEIMSKYYGESEEKLREVFEDAEQNAPAIIFIDELDSIAPKRE
EAGGDVERRVVAQLLSLMDGLEERGEVTVIAATNRVDAIDPALRRPGRFDREIDIGVPDR
EGRLEIMQVHTRGMPLADGVDLEAYADNTHGFVGADLESLAKEGAMNALRRIRPEIDLEE
DEIPADVLDSLQVTERDLKEALKGIEPSALREVFVEVPDVTWDQVGGLEDTKERLRETIQ
WPLDYPEVFEALDMEAAKGVLMYGPPGTGKTLMAKAVANESDSNFISIKGPELLSKWVGE
SEKGVREVFSKARENAPTVVFFDEIDSIATERGSGGGGGAEVSERVVSQLLTELDGLEEL
EDVVVIATSNRPDLIDSALLRPGRLDRHVHVPVPDEEARKAIFEVHTRDKPVADDIDLDW
LASETEGYVGADIEAVTREASMAASREFIQSVDPEDIGESVGNVRISREHFEQALEEVTP
SVTEKTKERYEEIEEQFDTAEPAKEQDQLGRTFQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgtcaagccgttgaaacagaaggacgccgggcgcggactggccgcggta
gaccgccagtcgatgcacgaactcggcgtcgaaaacggcgattacatcgtcatcgagggg
aagaatcagggtcgggcggtggcccgcgtctggccgggctaccccgaagacgagggacgg
agcatcgtccgcatcgacgggcaactccgacaggaggccggggtcggcatcgacgacaag
gtgactatcgagaaggccgacgtgaaaccggccaactccgtcaccatcgcgctcccccag
aacctccagattcggggcgacatcacgccccacatccgcgacaagctcagcggacaggcc
atcacgcagggccagaacgtgcccttcggcttcggcctgatgggcatggggtcgggccag
tccatcccgctcaaggtcgctagcaccgaccccgaggggacggtggtcgtgaccgactcg
accacgataaacatcagcgagcgcgccgccgaggagatcgcgcagggcgcgagcggcggt
cccgagggcacgccgagcgtgacctacgaggacatcggcggtctcgaaggcgaactcgag
caggttcgggagatgatagagctgccgatgcgccaccccgaactgttcagcaggttgggt
atcgacccgccgaagggcgtcctgctccacggcccgccgggcacgggcaagaccctgatg
gcgaaggccgtcgccaacgaaatcgacgcgcacttccagaccatctcgggccccgaaatc
atgagcaagtactacggggagtccgaggagaaactccgcgaggtgttcgaggacgccgag
cagaacgctccggccatcatcttcatcgacgagttggactccatcgcgcccaagcgcgag
gaggccggcggcgacgtggaacgccgcgtcgtggcccaactgctctcgctgatggacggc
ctcgaagagcgcggtgaggtcaccgtcatcgcggcgaccaaccgcgtggacgccatcgac
ccggcgctccgtcgcccgggccgcttcgaccgcgaaatcgacatcggcgtcccggaccgc
gagggccgcctcgaaatcatgcaggtccacacccgcgggatgcccctcgcggacggcgtg
gacctcgaagcgtacgccgacaacacccacggcttcgtcggcgcggacttagagagtctc
gccaaggagggcgcgatgaacgcgctccggcgcatccggcccgaaatcgacctcgaagag
gacgagattccggccgacgtgctcgactcgctgcaagtgaccgagcgcgacctcaaggag
gcgctgaagggcatcgaaccctcggcgctccgcgaggtgttcgtcgaggtccccgacgtg
acgtgggaccaagtcggcggactcgaagacaccaaagagcgcctccgggagaccatccag
tggccgctcgactaccccgaggtgttcgaggccctcgacatggaggccgccaagggcgtg
ctgatgtacggcccgcccggcaccggtaagacgctgatggcgaaggccgtcgccaacgag
agcgacagcaacttcatctcgatcaagggtcccgaactgctgagcaagtgggtcggcgag
tccgagaagggcgtccgcgaggtgttcagcaaggcccgggagaacgccccgacggtggtg
ttcttcgacgagatagactccatcgccaccgagcgcggaagcggcggtggcggcggtgcc
gaggtcagcgaacgggtcgtctcccaactgctgaccgaactcgacggcctcgaggaactc
gaagacgtggtcgtcatcgccacctcgaaccggccggacctcatcgacagcgcgctgctg
cggcccggacgcttggaccgccacgtccacgtgccggtgcccgacgaggaggcccgcaag
gccatcttcgaggtccacacccgcgacaagcccgtcgccgacgacatcgacctcgactgg
ctcgcgagcgagaccgagggctacgtcggcgcggacatcgaggccgtcacccgcgaggcc
tcgatggccgccagccgggagttcatccagagcgtggaccccgaggacatcggcgagagc
gtcggaaacgtccgcatcagcagggaacacttcgagcaggcgctcgaagaagtgaccccg
agcgtcaccgagaagaccaaggagcgctacgaggaaatcgaagagcagttcgacacggcc
gaacccgccaaagagcaggaccaactgggacgcacgttccagtag
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