Halorussus limi: M0R89_05050
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Entry
M0R89_05050 CDS
T08097
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
halx
Halorussus limi
Pathway
halx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
M0R89_05050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halx03000
]
M0R89_05050
03021 Transcription machinery [BR:
halx03021
]
M0R89_05050
Transcription factors [BR:
halx03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
M0R89_05050
Transcription machinery [BR:
halx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
M0R89_05050
RNA polymerase III system
TFIIIB
M0R89_05050
RNA polymerase I system
SL1/TIF-1B
M0R89_05050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
T4bSS_IcmS
Motif
Other DBs
NCBI-ProteinID:
UPV75437
UniProt:
A0A8U0HWY5
LinkDB
All DBs
Position
complement(975891..976451)
Genome browser
AA seq
186 aa
AA seq
DB search
MTDPKETINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFR
SGKIVCTGAKSTADVHESLEIVFDKLRELQIDVNEDPEIVVQNIVTSADLGRNLNLNAIA
IGLGLENIEYEPEQFPGLVYRLDEPEVVALLFGSGKLVITGGKKPEDAEQAVDKIVSRLE
ELGLLE
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacccaaaggagaccatcaacattgaaaacgtggtcgcctccaccggtatcggg
caggaactcgacctgcagagcgtggcgatggacctcgaaggggccgactacgacccggag
cagttccccggtctcgtctaccggacccagaaccccaagtccgcggcgctcatcttccgg
tccggcaaaatcgtctgtaccggcgccaagagcacggccgacgtacacgagagtctcgaa
atcgtcttcgacaaactccgtgaactccagatcgacgtgaacgaggaccccgaaatcgtc
gtccagaacatcgtcacgtccgcggacctcgggcgtaatctcaacctcaacgccatcgct
atcggtctcggactggagaacatcgagtacgaacccgagcagttccccggtctcgtctac
cgactcgacgaacccgaggtcgtcgcgctgctgttcggttccggcaaactcgtcatcacc
ggcgggaagaaacccgaagacgccgagcaggcggtcgacaagatcgtctctcgactcgaa
gaactcggtctgctggaatag
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integrated database retrieval system
