Halorussus limi: M0R89_08330
Help
Entry
M0R89_08330 CDS
T08097
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
halx
Halorussus limi
Pathway
halx03030
DNA replication
halx03420
Nucleotide excision repair
halx03430
Mismatch repair
halx03440
Homologous recombination
halx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
halx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M0R89_08330
03420 Nucleotide excision repair
M0R89_08330
03430 Mismatch repair
M0R89_08330
03440 Homologous recombination
M0R89_08330
03460 Fanconi anemia pathway
M0R89_08330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halx03000
]
M0R89_08330
03032 DNA replication proteins [BR:
halx03032
]
M0R89_08330
03400 DNA repair and recombination proteins [BR:
halx03400
]
M0R89_08330
Transcription factors [BR:
halx03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
M0R89_08330
DNA replication proteins [BR:
halx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
M0R89_08330
DNA repair and recombination proteins [BR:
halx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
M0R89_08330
MMR (mismatch excision repair)
M0R89_08330
DSBR (double strand breaks repair)
HR (homologous recombination)
M0R89_08330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
Ssb-like_OB
REPA_OB_2
OB_MEIOB_N
SSB
SHLD2_OB1
Motif
Other DBs
NCBI-ProteinID:
UPV76052
UniProt:
A0A8U0HY19
LinkDB
All DBs
Position
1622888..1624330
Genome browser
AA seq
480 aa
AA seq
DB search
MGAIEDVYADLDADVSLEEFREAVEEKVEQMGGLADEETAAMLIAHELDEEGGEVETVAD
IEPGMEEVKFVAKVVGVGDVRTFERDDEDREDGRVLNVEVADETGSIRITFWDKQADAGE
EELEVGDTLRIAGRPKEGYNGVEVNVNDAEPDDETDIDVQVQDTYRVEDLSLGLSDVNLR
GKVLDTDEVRTFDRDDGSEGKVANLKLGDSTGRIRVTLWDERTEAAERLDPGVSVEVVDG
YVRERDGSLELHVGNRGAVEEIDEDVAYEPETADIADLEIGDEADIGGVVRETQEKRTFD
RDDGSEGQVRNVRVQDETGDLRVALWGEKADVDVAPGDEIQLADVEIQDGWQDDIEGSAG
WQSTVTVLGEADPGAGSAGSGGGDEPESDGTGLDAFSGDDGASASGSDSGSADAASDDAG
SDGEFVEFTGTVVQAGDPIILDDGEETVSVESSSADVTLGEKVTARGELRDGTLDAEDVF
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgatagaggacgtttacgccgacctcgacgccgacgtatctctggaggagttc
cgcgaggcggtcgaggagaaggtcgagcagatgggcggtctcgccgacgaggagacggcc
gcgatgctcatcgcccacgagttggacgaggagggcggggaggtcgagaccgtcgccgac
atcgaaccgggcatggaggaagtgaagttcgtcgccaaggtcgtcggcgtcggcgacgtg
cgcaccttcgaacgcgacgacgaggaccgtgaggacggccgggtcctgaacgtcgaagtc
gccgacgagaccgggtcgatacgcatcacattctgggacaagcaggccgacgctggcgag
gaggaactcgaagtcggcgacaccctccgcatcgccggccgacccaaggaggggtacaac
ggcgtcgaggtcaacgtcaacgacgcagaacccgacgacgagaccgacatcgacgtgcaa
gttcaggacacctaccgcgtcgaggacctctcgctcggcctctcggacgtaaacctccgc
gggaaagtgctggacaccgacgaggtccgcaccttcgaccgcgacgacgggtcggagggg
aaggtcgccaacctcaaactcggcgactcgaccggccgcatccgggtgacgctctgggac
gagcgcaccgaggccgccgagcgactcgaccccggcgtctcggtcgaggtcgtggacggc
tacgtccgggagcgcgacgggagtctggaactccacgtcggcaaccgcggcgcggtcgag
gagatagacgaggacgtggcctacgaacccgaaaccgccgacatcgccgacctcgaaatc
ggcgacgaggccgacatcggcggcgtcgtgcgcgagacccaagagaagcggaccttcgac
cgcgacgacggttccgaaggacaggtccggaacgtccgcgtacaggacgagacgggcgac
ctccgggtggcgctctggggtgagaaagccgacgtggacgtggcaccgggcgacgaaatc
caactcgccgacgtggagattcaggacgggtggcaggacgacatcgaaggttcggccggg
tggcagtccaccgtcaccgtcctcggcgaggccgaccccggtgcggggtcggccggaagc
ggcggtggcgacgagcctgagagcgacggtacgggtctcgacgccttcagcggcgacgac
ggcgcgagtgcatccggttccgattcggggtcggcggacgcggcgagcgacgacgcggga
agcgacggcgagttcgtggagttcaccgggaccgtcgtacaggcgggcgacccgataatt
ctggacgacggcgaggagacggtcagcgtcgagtcgagcagcgccgacgtgaccctcggc
gagaaagtgaccgcgcgcggggaactgcgcgacggcacgctcgacgccgaggacgtgttc
tga
DBGET
integrated database retrieval system
