Halorussus limi: M0R89_09035
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Entry
M0R89_09035 CDS
T08097
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
halx
Halorussus limi
Pathway
halx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
halx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M0R89_09035 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halx03021
]
M0R89_09035 (rpoB)
Enzymes [BR:
halx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M0R89_09035 (rpoB)
Transcription machinery [BR:
halx03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
M0R89_09035 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Auto_anti-p27
Zn_ribbon_NOB1
zf-UBR
McsA
DUF5816
Motif
Other DBs
NCBI-ProteinID:
UPV76179
UniProt:
A0A8U0HZ62
LinkDB
All DBs
Position
1758386..1760212
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AA seq
608 aa
AA seq
DB search
MSQGREAKVYVNGSLVGTHPDPEQLAEQVRHARRRGDVSEMVNVSVKERTREVIINADAG
RARRPLLVIEDGEPLVTEEEIAAVENGDLDFDDLVERGKVEFIDAEEEEDIYVAVDEDDL
TEDHTHLEVDPQLIFGIGAGMVPYPEHNASPRITMGSGMIKQSLGLPAANYRIRPDTRQH
LLHYPQLSMVKTQTTEQIGYDDRPAAQNFTVAVMSYEGFNIEDALVLNGGSVDRALARSH
FFRTYEGEERRYPGGQEDRFEIPSDDVRGARGEDAYTHLDDDGLVNPETRVDENSVLLGK
TSPPRFLEEPDDMGGLSPQKRRETSVTMRSGESGVVDTVTLMEGEDGSKLSKVSVRDERI
PELGDKFASRHGQKGVVGHIAPQEDMPFTEQGVVPDLIINPHALPSRMTVGHVLEMIGGK
VGALEGRRVDGTPFTGEDEEELRGGLEEQGFKSSGKEIMYSGITGEKIEAEIFIGTIFYQ
KLYHMVSNKLHARSRGPVQVLTRQPTEGRAREGGLRVGEMERDVLIGHGAALTLKERLLD
ESDREWIYVCANCGMSAVENVEQNRVYCPNCDEETDIHEIEMSYAFKLLLDEMKALGIAP
RLELEDAV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagggacgagaagcgaaagtatacgtgaacggtagtctggtcggaacgcacccc
gaccccgaacagctcgcagaacaggtccgccacgcgcgtcgccgcggcgacgtgagcgag
atggtcaacgtctcggtcaaagagcggacacgcgaggtcatcatcaacgccgacgccggg
cgcgcccggcgacccctgctggtcatcgaggacggcgaacccctcgtcaccgaggaggag
attgcggcggtcgagaacggcgacctcgacttcgacgacctcgtggagcgcggcaaggtc
gagttcatcgacgccgaggaggaagaggacatctacgtcgcggtggacgaggacgacctc
accgaggaccacacccacctcgaagtcgacccgcaactcatcttcggtatcggtgcgggc
atggtcccgtaccccgaacacaacgcctcgccccggattacgatggggtcggggatgatc
aagcagtcgctcgggctgccggcggccaactaccgcatccggcccgacacgcgccagcac
ctcctgcactacccgcagctctcgatggtcaagacccagacgaccgagcagatcgggtac
gacgaccgcccggcggcccagaacttcacggtcgccgtcatgtcctacgagggcttcaac
atcgaggacgcgctcgtcctcaacggtggctccgtggaccgcgcgctggcccgctcgcac
ttcttccggacgtacgagggcgaggaacggcgctaccccggcggacaggaggaccgcttc
gagattccgagcgacgacgtgcgcggcgcgcgcggtgaagacgcgtacacccacctcgac
gacgacggtctggtcaaccccgagacgcgcgtggacgagaacagcgtcctgctcggcaag
accagtccaccccggttcctcgaagaacccgacgacatgggcggtctctccccgcagaag
cgccgggagacctccgtcaccatgcgctcgggcgagtccggcgtcgtggacacggtcacg
ctgatggagggcgaggacgggtcgaagctctcgaaggtctcggtgcgcgacgagcggatt
ccggaactcggcgacaagttcgcgtcccggcacggccagaagggcgtcgtcggccacatc
gcgccccaggaggacatgccgttcaccgagcagggcgtcgtgcccgacctcatcatcaac
ccccacgccctgccgtcccggatgacggtcggccacgtgctggagatgatcggcggcaaa
gtcggtgccctcgaagggcgacgcgtggacgggacgccgttcacgggcgaggacgaggag
gaactccgcggcggactcgaagagcagggcttcaagtcctccgggaaggagatcatgtac
tccggcatcaccggggagaagatcgaggcggagatcttcattggcaccattttctaccag
aagctctaccacatggtgtcgaacaagctccacgcccgctcgcgcggcccggtgcaggtg
ctcacgcgccaacccaccgagggtcgggcccgcgagggtggtctccgcgtcggggagatg
gagcgggacgtgctcatcgggcacggtgccgccctgaccctgaaggaacgtctgctcgac
gagtccgaccgcgagtggatatacgtctgtgccaactgtggcatgagcgcggtcgagaac
gtcgagcagaaccgcgtctactgcccgaactgcgacgaggagacggacatccacgaaatc
gagatgtcgtacgcgttcaagctcctgctggacgagatgaaggcgctcggcatcgcaccg
cgactagaactggaggacgcagtctaa
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