Halorussus limi: M0R89_09490
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Entry
M0R89_09490 CDS
T08097
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
halx
Halorussus limi
Brite
KEGG Orthology (KO) [BR:
halx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
halx03009
]
M0R89_09490
Ribosome biogenesis [BR:
halx03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
M0R89_09490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
Fer4_RLI
AAA_16
AAA_22
AAA_23
AAA
AAA_14
Rad17
nSTAND3
RNA_helicase
NACHT
AAA_29
AAA_33
AAA_24
Fer4
Fer4_6
AAA_5
NB-ARC
Fer4_7
Fer4_9
Motif
Other DBs
NCBI-ProteinID:
UPV72782
UniProt:
A0A8U0HP25
LinkDB
All DBs
Position
complement(1846911..1848725)
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AA seq
604 aa
AA seq
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MADDSIAVVDLERCQPDRCNYECKNYCPPNRTGKECITLRGDDADEGEPDQVHISEEICL
GETCGICVEKCPFDAIEIINLPQELEDDPVHRYGENAFSLYGLPVPLEGQVTGILGPNGI
GKTTAVKALAGELAPNLGRHADPPGWDAVLDAYRGTELQDYLADVRDGEVSVARKPQYVD
KIPDQFDGSTEQLLENVDERGVLDDLLERLDIEHVREQDIDSLSGGELQRVALVACLARD
VDFYFIDEITPYLDISQRVKAARLIQEMAEEHGKSMLVVEHDLAILDLVADNLHVAYGEP
GAYGVITSPKSVRNGINEYLKGYLDNENMRIRPNAIEFEEHAPRQVSRADTLVEYPDISK
SYGEGEFSLDVEGGTIRENEVLGIVGPNGIGKSTFAQLLAGRLEPDEGEADFDLDIAYKP
QYIEIDQPMRTDSFLRSITDRVGSSYWNTEIAQPLQLDRIMEQQLTDLSGGERQRVAIAA
CLSETADLYLLDEPSAYLDVEQRVRATNAIRRFAEQQDATVMVIDHDIYMIDLLADRLMV
FDGEPAVHGRASEPKGMRDGMNDFLANLDITFRRDENVGRPRINKPGSQLDKEQKKQGEY
YYSL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacagtatcgcagtcgtggacctcgaacggtgtcaacccgaccggtgcaac
tacgagtgtaagaactactgtccgccgaaccgcaccggcaaggagtgcatcacactccgg
ggcgacgacgccgacgagggcgaacccgaccaagtacacatcagcgaagagatctgcctc
ggggagacctgcggcatctgcgtcgagaagtgtccgttcgacgcgatagagataatcaac
ctcccccaggagttggaggacgacccggtccaccggtacggcgagaacgccttctcgctg
tacggcctgccggtcccgctggaagggcaggtcaccggcatcctcggcccgaacggtatc
gggaagaccacggcggtcaaggcgctggccggcgaactcgcgcccaacctcggccggcac
gccgacccgccggggtgggacgcggtgctggacgcctaccgggggaccgaactccaagac
tacctcgccgacgtgcgagacggcgaggtcagcgtcgcgcgcaagccccagtacgtggac
aagattcccgaccagttcgacgggtcgaccgagcaactgctggagaacgtggacgagcga
ggcgtgctggacgacctgctcgaacgcctcgacatcgaacacgtccgcgagcaggacatc
gacagcctgtcgggcggcgaactccagcgggtcgcgctggtggcgtgtctggcccgcgac
gtggacttctacttcatcgacgagattacgccgtacctcgacatcagccagcgcgtgaag
gccgcgcgcctgattcaggagatggccgaggaacacggcaagtcgatgctcgtggtcgaa
cacgacctcgccatcctcgacctcgtggccgacaacctccacgtggcgtacggtgaaccc
ggcgcgtacggcgtcattacctcgccgaagtcggtccggaacggcatcaacgagtacctc
aaggggtatctcgacaacgagaacatgcgcatccggccgaacgccatcgagttcgaggaa
cacgcgccgcggcaggtgtcgcgagccgacacgctggtcgagtaccccgacatctccaaa
tcctacggcgagggcgagttctcccttgacgtggagggcgggacgattcgggagaacgag
gtgctgggcatcgtcgggccgaacggcatcgggaagtccaccttcgcgcaactgctggcg
ggtcgcctcgaacccgacgagggcgaggccgacttcgacctcgacatcgcgtacaagccc
cagtacatcgaaatcgaccagccgatgcggaccgacagtttcctgcgctctatcaccgac
cgcgtggggtcgtcgtactggaacaccgaaatcgcccaaccgctccagttggaccgcatc
atggagcaacagctcaccgacctctcgggcggcgagcgccagcgggtcgccatcgcggcc
tgcctctcggagaccgccgacctctacctactggacgaaccgtcggcgtatctcgacgtc
gaacagcgggtccgcgcgaccaacgccatccgccggttcgccgaacagcaggacgccacc
gtgatggtcatcgaccacgacatctacatgatagacctgctggccgaccgcctgatggtg
ttcgacggcgaacccgcggtccacggccgcgccagcgaacccaaggggatgcgcgacggc
atgaacgacttcctcgccaacctcgacatcaccttccggcgcgacgagaacgtcggccgc
ccccgcatcaacaagccggggagccaactcgacaaggaacagaagaagcaaggcgagtac
tactactcgctctga
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