Halorussus limi: M0R89_10430
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Entry
M0R89_10430 CDS
T08097
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
halx
Halorussus limi
Pathway
halx03420
Nucleotide excision repair
halx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
halx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M0R89_10430
03430 Mismatch repair
M0R89_10430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halx03400
]
M0R89_10430
Enzymes [BR:
halx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M0R89_10430
DNA repair and recombination proteins [BR:
halx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M0R89_10430
MMR (mismatch excision repair)
Other MMR factors
M0R89_10430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
DUF2020
NgoMIV_restric
Motif
Other DBs
NCBI-ProteinID:
UPV72964
UniProt:
A0A8U0HQL0
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All DBs
Position
complement(2020923..2022785)
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AA seq
620 aa
AA seq
DB search
MVDLELDDVNLTGIDEYPPDSSVKLNGPPGTGKTTQSAGRVGRLLRDYDYEIDDVAWVTY
RKSLAKDTLTRLAAWGLVDSSELANPSEGPTRYIGTFHAVANRVAGGDVDVAGYYDQQDF
CKKWNIRFQKRSPWDEPPGELLFDTFYYCANNLLNPTKTKDLNKAPMIDDLRNKWQGDIA
KVWQDWQDYKETKGLIDYYEMLLRPITKQQTPNRDILVVDEYHDATPLMAKLAEYWADDA
EVVIFAGDPHQVVNSYAGADPDFYERVDLPEVLLDKTYRVPYEHWSVAERVLNQAHDPPQ
VERTTTGSFSDGTSPSFRYSRDNGWDVPEPSEERSPVWFVEKVGKDTMFLTRTRKQADGV
AKALEKAGVLYQTQNSMKRDGWQAGDRGEMNTRTAVYNALQKIEGLRPGDFNGHGLGEYT
DTSRSTNIKLDPPEAAALLRHTRVDNLAQSRDETTEIAQEIRELEEKTTVGELRQYVEDE
FWTTYTTGARAVGELAKNPAGRSSLDTRDLEALKPALRRNDGPVGQVETLVYTVHASKGT
EAANVIVYDGITGQIQDEISRDADARANECRTWYVALTRASKRLVVLRDGFEWMHSYLPN
NLLDMARDGYEQAKNAGVAA
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggtggacctagagttagacgacgtgaatctgacaggtatcgacgagtacccgccggac
tcgtcggtgaaactgaacggcccgccggggaccggaaagaccacccaatcggcggggcgc
gtcgggcgactactccgagactacgactacgagatagacgacgtggcgtgggtcacgtac
cgcaagagcttggcgaaggacacgttgacccgtctcgcggcatggggactcgttgattcg
tcggaactcgccaacccatctgaggggccgacgcggtacatcgggacgtttcacgcggtc
gccaaccgggtcgccgggggcgacgtggacgtggcgggctactacgaccagcaggacttc
tgtaagaagtggaatatccggttccaaaagcgtagcccgtgggacgaaccgccgggcgaa
ctcctgtttgacacgttctactactgcgcgaataacctgctgaacccgacgaaaacgaaa
gacctgaacaaagcccccatgattgacgaccttcggaacaagtggcagggcgacatagcg
aaagtgtggcaggattggcaggactacaaagagacgaagggcctgatagactactacgag
atgctgttgcggccaatcacgaagcaacagacgccgaaccgggatattctcgtcgtagac
gagtaccacgacgccacgccccttatggcgaaactcgccgagtattgggccgacgacgcc
gaagtggtgatcttcgcgggcgacccgcaccaagtcgtcaactcctacgcgggcgcggac
cccgacttctacgagcgcgtggacctgccggaagtgctgttggacaagacctaccgcgtg
ccctacgagcattggtctgtcgcggagcgtgtgctgaatcaggcgcatgacccgccacag
gtcgaacgcactaccaccgggtcgttctcggacggtacgagtccgagtttccggtactcc
cgcgacaacgggtgggacgtgccggaaccgtcggaagaacggtcgccggtctggtttgtg
gaaaaggtcgggaaggacaccatgttccttacccggacgcgcaagcaggccgacggcgta
gcgaaggccctcgaaaaagcgggcgtgctgtatcagacacagaacagcatgaagcgcgac
gggtggcaggcgggcgaccggggcgagatgaacacacgcacggcggtctacaacgcctta
cagaaaattgaggggctacgccccggcgacttcaacggccacggactcggcgaatacacg
gacacgtcgcggtccacgaacatcaagttggacccgccggaagcggcggcgttgctccgg
catacgcgggtggacaatctcgcacagtcgcgggacgaaaccacggaaatcgcgcaagaa
atcagggaactagaggaaaagacgacggttggtgaactccggcagtacgtcgaagacgag
ttttggaccacctacactacgggtgcgcgggcggtgggtgagctagcgaagaacccggcg
gggcggtcgtcgttggacacccgcgacctagaggcgttgaagcccgcgcttcgacggaac
gacggccctgtgggacaggtggaaacactcgtctacaccgtccacgcctcgaaggggacg
gaagccgccaacgtaatcgtctacgacggtatcacggggcagatacaagacgagataagc
cgagacgccgacgcacgcgccaacgagtgtcggacgtggtacgtggctctcacgcgggcg
tcaaagcgtctcgtcgtgctacgcgacggcttcgagtggatgcacagttacctgccgaac
aacctgttggacatggcccgcgacggctacgaacaggcgaagaacgcgggggtggcggca
tga
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