Halorussus limi: M0R89_10670
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Entry
M0R89_10670 CDS
T08097
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halx
Halorussus limi
Pathway
halx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
M0R89_10670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halx03021
]
M0R89_10670
Transcription machinery [BR:
halx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
M0R89_10670
Prokaryotic type
Archaeal type
TFB
M0R89_10670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
A2L_zn_ribbon
Trm112p
HTH_Tnp_ISL3
Anti-TRAP
Cas12f1-like_TNB
DZR_2
DZR
Motif
Other DBs
NCBI-ProteinID:
UPV73012
UniProt:
A0A8U0HPP0
LinkDB
All DBs
Position
complement(2072261..2073229)
Genome browser
AA seq
322 aa
AA seq
DB search
MSDVTTRVKRTEAEEEVEEETDESTACPECNGNLISDTEHGETVCEECGLVVDEDQVDRG
PEWRAFDSKEKNEKSRVGAPTTNTMHDKGLSTNIDWRNKDAYGNSLGSRQREKMQRLRKW
NERFRTRDSKERNLKQALGEIDRMASALGLPNNVRETASVIYRRALDEDLLPGRSIEGVS
TACVYAAARQAGVPRSLDEIADVSRVEKSEVARTYRYVVRELNLEVKPADPESYVPRFAS
GLDLSDEAEHRARELLQTAKEKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAEVSEVADI
SEVTIRNRYHELLEAEEAPAMA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgtaactacgcgagtcaagcgaacggaagcagaggaagaggtcgaagaagaa
accgacgagtcaaccgcctgccccgagtgcaacgggaatctcatctcggacaccgaacac
ggcgagacggtctgcgaggagtgcggactggtcgtcgacgaggaccaggtcgaccgcggg
ccggagtggcgcgcgttcgactccaaggagaagaacgagaagtcccgcgtcggcgcgccg
acgacgaacacgatgcacgacaagggcctctcgaccaacatcgactggcggaacaaggac
gcctacggcaactcgctggggtcgcgccagcgcgagaagatgcagcggcttcgcaagtgg
aacgagcggttccgcacccgcgacagcaaggagcgcaacctcaagcaggcgctcggcgaa
atcgaccgcatggcctccgcgctcggcctcccgaacaacgtccgtgagaccgcgtcggtc
atctaccgccgcgcactcgacgaggacctcctgcccggccgctccatcgagggcgtctcg
acggcctgcgtctacgccgccgcgcggcaggcgggcgtcccgcggagtctggacgaaatc
gccgacgtgagtcgagtcgagaagagcgaggtcgcacggacctaccgctacgtggtacgg
gaactcaacctcgaagtcaagcccgcggaccccgagagctacgtcccgcggttcgcctcc
ggactcgacctctcggacgaggccgaacaccgcgcccgcgaactgctccagaccgccaag
gagaagggcgtccacagcggcaagtcgccggtcggactcgccgccgccgcggtctacgcc
gccgccctcctgaccaacgagaagaccacgcaggcagaggtcagcgaggtcgccgacatc
agcgaagtcactatccgaaaccgctaccacgaactgctggaggccgaagaggcccccgcg
atggcctga
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