Halorussus limi: M0R89_11980
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Entry
M0R89_11980 CDS
T08097
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
halx
Halorussus limi
Pathway
halx00300
Lysine biosynthesis
halx00470
D-Amino acid metabolism
halx01100
Metabolic pathways
halx01110
Biosynthesis of secondary metabolites
halx01120
Microbial metabolism in diverse environments
halx01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
halx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M0R89_11980 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M0R89_11980 (dapF)
Enzymes [BR:
halx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
M0R89_11980 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
UPV73262
UniProt:
A0A8U0HQC3
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Position
complement(2318706..2319632)
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AA seq
308 aa
AA seq
DB search
MSIEFEKFHGTGNDFVVVDADEYVPDRGAFAREVCDRRDGVRLTDGGAADGGATTAPTDS
VGADGALFLALEPKFSPPRAVMTLVQPDGSTAAMCGNGARCAAKWAAERTGADTVMLDTQ
AGTRRAEISDDEVTIEMGAPSFAPGDVPLAPDREQPLVEETVEGVEVTAVNTGVPHAVAF
VEDVDEVDLDAVAPAVRHADAFPEGANVTFASRRSEAGDGDTVAFDQRTYERGVEGETSA
CGTGAVAIAAVARRAGEIDGDASVGVFPPGGRLGVTFRGERASLTGPAEREFTGEISSTP
EPRRVSEA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgaattcgagaagttccacggcaccggcaacgatttcgtagtagtagacgcg
gacgagtacgtccccgaccggggcgcgttcgcccgcgaagtgtgcgaccgacgcgacggc
gtgcgcctcaccgacggcggcgcggccgacggcggcgcgacgacagcgccgaccgactcg
gtgggggcggacggggcgctgtttctggcgctcgaacccaagttctcgccgccgcgggcg
gtgatgacgctggtccaaccagacgggtcgaccgccgcgatgtgcggcaacggcgcgcgg
tgcgccgcgaagtgggccgccgagcgtaccggtgccgacaccgtgatgctcgacacgcag
gccgggacccgccgggccgagatatcggacgacgaggtgaccatcgagatgggggcgccg
tcgttcgcgcccggcgacgtaccgctcgcgcccgaccgcgaacaaccgctggtcgaagag
accgtcgagggcgtggaagtgaccgcggtgaacaccggcgtgccccacgccgtcgcattc
gtcgaggacgtcgacgaggtggacctcgacgcggtcgctcccgcggtccgtcacgccgac
gccttccccgagggcgcgaacgtcacgttcgcgtcgcggcggagcgaggccggcgacggc
gacaccgtcgccttcgaccagcggacctacgagcgcggcgtcgagggcgagaccagcgcc
tgcggcaccggcgcggtcgcaatcgcggcggtcgcccggcgagcgggcgaaatcgacggc
gacgcgtcggtcggcgtcttcccgccgggcggtcgcctcggcgtgacgttccgcggcgag
cgcgcgagtctgaccggcccggccgagcgcgagttcacgggcgagatttcctcgacgccc
gaaccgcggcgagtctccgaggcctga
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