Halorussus limi: M0R89_13610
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Entry
M0R89_13610 CDS
T08097
Name
(GenBank) PAS domain S-box protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
halx
Halorussus limi
Brite
KEGG Orthology (KO) [BR:
halx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halx03000
]
M0R89_13610
Transcription factors [BR:
halx03000
]
Prokaryotic type
Helix-turn-helix
Other families
M0R89_13610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
GAF_2
PAS_4
GAF
PAS
PAS_9
HTH_10
GAF_3
PAS_8
PAS_3
Sigma70_r4
PAS_7
Sigma70_r4_2
HTH_20
HTH_24
HTH_1
HTH_5
HTH_11
GerE
MarR_2
Diguanyl_cycl_sensor
HTH_36
HTH_17
HTH_Crp_2
HTH_23
Mod_r
DASH_Duo1
HTH_3
HTH_IclR
MarR
LacI
Xre-like-HTH
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
UPV73572
UniProt:
A0A8U0HR64
LinkDB
All DBs
Position
2628997..2632305
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AA seq
1102 aa
AA seq
DB search
MTDPVRVLYVTGDASTGERLEALFEEERPAVAFSFVTSAEGALDTVDDESLDHVVLDTDF
PDRDDVETALERETAARVETVASSIPERTAGSQSDQFRRSETERVRILATRIETAVSSGT
ASDDGIDGERFRALAEGLTDVVLVIDAESTIRYANPAASKVFGYPPDELVGEPLTLLMPE
DLAEAHEQGMARYLRTGERHVDWNYLELPGQRRDGTELPLGVSFSELDSGEDVRFTGIVR
DISERKRRESELRDRIRQQEALATFSRHALEDWPVGDLMNEAVELVADALDNEYAGVLEY
RPGEDDLLVRAVFGWDDDLVGAASIGTERDSQAGYTLLSEEPVVVENRATEDRFAGDSLL
DSAGAVAGISAIIGSPEDPWGILGAHTTRERSYADYDVQFVQNIAHILATVIQRRERERR
LERSEAMLDAVDDGVYALDADSRFVAVNDAYVELTGYGRERLLGAHAETILGSETYGEVE
WVQEALESDEDVVTLEARMPTADGGSIPVEARVAPLPLEDGTGRVGVVRNVSDRKRREQK
LTSLNQLFRSLTEAETPTEISDLAVEAAVETLGFPNAAVALYDDRESTLVPTVKRWTGDE
IDDALVGRHAEDVAWQAFVESETKTFEDLRAEVDADTEMRSALAVPLGKYGVFVAAAPET
GAFDSTDLSLADMLSSNVRTALDRAEREETLREQRNDLQAKNRELERVNRLNSVIRDITK
SLTQAASEEDAMQAVCNRLTQSGSYRFAWFGTHDRVTDRIRPEVKAGIEDGYLEDIAVTA
EEGEAVGEGPAGRAVRTGAIQAQNDLLGDPPFEPWREQALKRGYRSCVSVPVSYDEMLHG
VLTIYAEETGVFDELEQAVLSELGDTIGYALNALEQKQALVSERSIELDFRIRGSESPIL
AFVAETGAEFEFQNAVQRSDGRLHVFFTIEGADSDEALAFAEGVPWIESVRLVTEGDGES
LFECTLSGRSFLRSLMDRGAMPRTLTAAGDEGRFVIRVPQSADVRTFVNHFEDYYGEAQL
VARRERDDPVMTKQDFESELADRLTERQREVLQLAYFGGYFEWPRGSTAQELAETLGVSQ
PTVSRHIRSAERALFGILFEDE
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacccggttcgcgtcctctacgtcaccggggacgcatcgacaggtgaacgactc
gaagcgctcttcgaggaagagcgtccagcggtcgcgttctcgttcgtcacgagcgccgag
ggtgcgctcgataccgtcgacgacgaatccctcgaccacgtcgtcctcgacaccgacttc
ccggaccgcgacgacgtcgagaccgcgctcgaacgggagaccgccgcgcgcgtcgagacc
gtcgcgtcgtcgatacccgagcggaccgccgggtcgcagtccgaccagttccggcggtcc
gagaccgaacgggtccggattctggcgacccgcatcgagaccgcggtctcgtccgggacc
gcgtccgacgacggcatcgacggcgagcggtttcgcgcactcgccgagggactcacggac
gtcgtcctcgtcatcgacgccgagagcacgattcggtacgcgaaccccgcggcgtcgaag
gtgttcggctacccgcccgacgaactcgtcggcgaaccgctcacgctcctgatgcccgag
gacctcgccgaggcccacgagcaggggatggcccggtacctccggaccggggagcgacac
gtcgattggaactacctcgaactccccggccagcgccgcgacgggaccgaactgccgctg
ggcgtctcgttcagcgagttggactccggcgaggacgtccgattcaccggcatcgtccgc
gacatctccgaacgaaagcgccgggagtcggagctacgtgaccgaatccgccagcaggag
gcgttggcgacgttctcccggcacgcgttggaggactggcccgtcggcgacctgatgaac
gaggcggtcgaactcgtcgccgacgccctcgacaacgagtacgccggggtgctggagtac
cgccccggcgaggacgacctgctcgttcgggcggtcttcgggtgggacgacgacctcgtg
ggcgcggcgtccatcggcaccgagcgcgactctcaggcgggttacacgctgctctcggag
gaaccggtcgtcgtcgagaacagggcgaccgaggaccggttcgccggcgactcgctgctc
gactccgcgggagcggtcgccggcatcagcgcgataatcgggtcgcccgaagacccgtgg
ggaatcttgggggctcacaccacccgcgagcggtcgtacgccgactacgacgtgcagttc
gtccagaacatcgctcacatcctcgcgacggtcattcagcgccgcgagcgcgagcgccga
ctcgaacgctccgaagcgatgctcgacgcggtggacgacggcgtgtacgcgctcgacgcc
gactcccggttcgtcgcggtcaacgacgcctacgtcgaactgaccggctacggccgggag
cgactgctcggtgcgcacgccgagaccatcctcggttcggagacctacggggaggtcgag
tgggttcaggaagcgctcgaatccgacgaggacgtggtgacgctcgaggcgaggatgccg
accgccgacggcgggtcgattccggtcgaggcccgagtcgcgccccttccgctcgaagac
ggaacgggtcgggtcggcgtggtccggaacgtctcggaccgcaagcgccgcgagcagaaa
ctcacctcgctcaaccaactgttccggtcgctgaccgaggccgagaccccgaccgaaata
tcggacctcgcggtcgaggccgccgtcgagacgctcggctttccgaacgctgcggtcgcg
ctgtacgacgaccgagagagcacgctcgtcccgaccgtcaagcggtggaccggcgacgag
atagacgacgcgctcgtgggccgtcacgccgaggacgtggcgtggcaggcgttcgtggag
agcgagacgaagacgttcgaggacctccgcgccgaagtagacgccgacaccgagatgcgg
agcgcgctcgcggtcccactgggcaagtacggtgtgttcgtcgccgcggcccccgaaacg
ggcgccttcgactcgaccgacctctcgctcgcggacatgctgtcctcgaacgtccggacc
gcgctggaccgggccgagcgcgaggagaccctccgcgaacagcgcaacgacttgcaggcg
aagaaccgcgaactcgaacgggtcaaccgtctcaacagcgtgattcgcgacatcaccaag
tcgctgacgcaggccgcctcggaggaggacgcgatgcaggcggtctgcaaccgactgacc
cagtccggttcctatcggttcgcgtggttcggcacccacgaccgggtgacggaccggatt
cggccggaggtcaaggccggaatcgaggacggctatctcgaggacatcgcggtgacggcc
gaggagggcgaggcggtcggtgagggaccggccggacgcgcggtccggaccggcgcgata
caggcccagaacgacctgttgggcgacccgcccttcgaaccgtggcgcgagcaggcgctc
aaacgcggctatcggtcgtgcgtgtcggtcccggtgagctacgacgagatgctccacgga
gttctgaccatctacgccgaggagaccggcgtgttcgacgaactggagcaggcggtgctg
tcggaactcggcgacaccatcggctacgcgctcaacgcgctcgaacagaagcaggcgctc
gtcagcgagcgctcgatagaactcgacttccggattcgggggtccgagagtccgatactc
gcgttcgtcgccgagaccggcgcggagttcgagtttcagaacgcggtccaacgcagcgac
ggtcgcctccacgtattcttcaccatcgaaggggcggactccgacgaggccctcgcgttc
gccgaaggggtgccgtggatagagtccgtccgcctcgtgaccgagggcgacggcgagtcc
ctcttcgagtgtacgctctcgggtcgaagcttcctccggtcgctgatggaccgcggcgcg
atgccccggacgctaaccgccgccggggacgagggccggttcgtgattcgcgtcccgcag
agcgccgacgtgcggacgttcgtcaaccacttcgaggactactacggggaggcgcagctg
gtcgctcggcgcgagcgcgacgaccccgtgatgacgaaacaggacttcgagtcggaactc
gcggacagactcaccgagcgccagcgggaggtcctccagttggcgtacttcggcgggtac
ttcgagtggcctcgcggaagcaccgcacaggagcttgcggagacgctcggcgtctctcag
ccgaccgtgagccgtcacatccggagcgccgaacgggcgctattcggcatcctgttcgaa
gacgagtag
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