Halorussus limi: M0R89_14835
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Entry
M0R89_14835 CDS
T08097
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halx
Halorussus limi
Pathway
halx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
M0R89_14835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halx03021
]
M0R89_14835
Transcription machinery [BR:
halx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
M0R89_14835
Prokaryotic type
Archaeal type
TFB
M0R89_14835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Sigma70_r4
A2L_zn_ribbon
Zn_ribbon_tTFIIB
DZR
Trm112p
Auto_anti-p27
DNA_ligase_ZBD
Ribosomal_S27
Zn_ribbon_RRN7
Zn_ribbon_Nudix
Cas12f1-like_TNB
DUF1272
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
UPV73808
UniProt:
A0A8U0HSG3
LinkDB
All DBs
Position
complement(2887313..2888281)
Genome browser
AA seq
322 aa
AA seq
DB search
MTETRTRTHTDERTTDEQETEREENHCPECGGNLVADEERGETVCGECGLVVDEDQIDPG
PEWRAFDSKEKDQKSRVGAPTTNTMHDKGLSTNIGWQDKDAYGNSLGSRQREKMQRLRKW
NERFRTRDSKERNLKQALGEIDRMASALGLPDNVRETASVIYRRALDEDLLPGRSIEGVA
TSALYAAARQAGTPRSLDEISGVSRVEKDEIARTYRYVVRELNLEIQPADPKSYVPRFVS
DLGVSDEVERRARDLLDTATEKGIHSGKSPVGLAAAAVYAAALLSNEKVTQSEVSDVSDI
SEVTIRNRYHELLEAKEDAIAP
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaacacgcacccgaacccacaccgacgagcgaaccaccgacgagcaagagacc
gagcgcgaggagaaccactgccccgagtgcggcgggaacctcgtcgccgacgaagagcgc
ggcgagacggtctgcggggagtgcggtctagtcgtcgacgaggaccagatcgaccccgga
cccgagtggcgcgcgttcgactccaaggagaaagaccagaagtcccgcgtcggcgcgccg
acgacgaacacgatgcacgacaagggtctctcgaccaacatcggctggcaggacaaggac
gcctacggcaactcgctcgggtcccgtcaacgcgagaagatgcagcggcttcgcaagtgg
aacgagcggttccgcacccgcgacagcaaggagcgcaacctcaagcaggcgctcggcgaa
atcgaccgcatggcctccgcgctcggcctcccggacaacgtgcgcgagaccgcctcggtc
atctaccgtcgtgcgctcgacgaggacctccttccgggccgctccatcgagggcgtcgcc
acctccgcgctctacgccgccgcccggcaggcgggcacgccccggagtctggacgaaatc
agcggcgtctcccgcgtggagaaggacgaaatcgctcggacctaccgctacgtggtacgg
gaactcaacctcgaaatccaacccgccgaccccaagagctacgtcccgcggttcgtctcg
gacctcggcgtgagtgacgaagtcgagcgccgcgcccgcgacctgctcgacaccgcgacc
gagaagggcatccacagcggcaagtcgccggtcggactcgccgccgccgccgtctacgcc
gccgccctcctcagcaacgagaaggtgacccagagcgaggtcagcgacgtttcggacatc
agcgaagtcacgattcgtaaccgctaccacgaactgctcgaagcgaaggaagacgccatc
gcgccctaa
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