KEGG   Halorussus limi: M0R89_15955
Entry
M0R89_15955       CDS       T08097                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
halx  Halorussus limi
Pathway
halx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:halx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    M0R89_15955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:halx03019]
    M0R89_15955
Messenger RNA biogenesis [BR:halx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     M0R89_15955
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B_2 Lactamase_B RMMBL
Other DBs
NCBI-ProteinID: UPV74019
UniProt: A0A8U0HT24
LinkDB
Position
3133413..3134765
AA seq 450 aa
MEIEIATIGGYEEVGRQCTAVRAGDDVVIFDMGLNLSKVLLHDNVETEKLHSLDLIDMGA
IPDDRVMSDLEGDVQAIVPTHGHLDHIGAISKLAHRYNAPVVASPYTIELVKQQIQGEQK
FGVENDLVKMEAGETMSIGDSGQVELEFVNVTHSIIDAINPVLHTPEGAVVYGLDKRMDH
TPVLGDPIDMKRFREIGREGEGVLCYIEDCTNAGRKGRTPSEAVARRHLKDVMTSIEDYD
GGIVATTFSSQIARVKSIVEFAQEIGREPVLLGRSMEKYSGTAERLDFVDFPEDMGMFGH
RKSVDRTFKRIMKEGKENYLPIVTGHQGEPRAMLTRMGRGETPYELENGDKVIFSARVIP
EPTNEGQRYQSERLLKMQGARIYDDIHVSGHLREEGHYEMIDALQPQNIIPAHQDMKGFA
PYVSLCESQGYKLGRDLHVTSNGNIIQLVE
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggaaatcgaaattgcaaccatcggcggttacgaagaagtcggacggcagtgtactgcc
gtgcgcgcaggcgacgacgttgtcatcttcgacatggggctgaacctctcgaaggttctc
ctccacgacaacgtcgagacagagaaactgcacagtctggacctcatcgacatgggggcc
atcccggacgaccgcgtgatgtcggacctcgaaggcgacgtgcaggccatcgttccgact
cacggtcacctcgaccacatcggcgccatcagcaaactggcgcaccggtacaacgcgccg
gtcgtcgcctcgccctacaccatcgaactggtcaaacagcagattcagggcgagcagaag
ttcggcgtcgagaacgacctcgtgaagatggaggcgggcgagacgatgtccatcggcgac
tccggacaggtcgagttggagttcgtcaacgtgacccactctatcatcgacgccatcaac
ccggtcctccacacgcccgagggcgcggtcgtctacggtctcgacaagcgcatggaccac
acgccggtcctcggcgaccccatcgacatgaagcggttccgcgaaatcggtcgcgagggc
gagggcgtcctctgttacatcgaggactgcaccaacgcgggccggaagggacgcacgccg
agcgaggcggtcgctcgacggcacctcaaggacgtgatgacctccatcgaggactacgac
ggcggcatcgtggcgacgacgttctccagccaaatcgcccgcgtcaagagcatcgtcgag
ttcgcgcaggagattggccgcgaacccgtcctgctcggccggtcgatggagaagtactcg
ggcaccgcggagcgactcgacttcgtcgacttccccgaggacatggggatgttcggccac
cgcaagtccgtggaccggaccttcaagcggatcatgaaggagggcaaggagaactacctc
cccatcgtcaccggtcatcagggcgaaccccgcgcgatgctcacccggatgggccgcggc
gagacgccctacgaactggagaacggcgacaaggtcatcttctcggcccgcgtgattccg
gaaccgaccaacgagggccagcgctaccagtccgagcgcctcctgaagatgcagggcgcg
cgcatctacgacgacatccacgtgtcgggccacctccgcgaggagggccactacgagatg
atagacgcgctccagccacagaacatcatcccggcccaccaagacatgaaagggttcgcg
ccctacgtgagcctgtgtgagagtcagggctacaaacttggtcgcgacctccacgtgacg
agcaacggcaacatcatccaactcgtcgagtaa

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