Halorussus limi: M0R89_18455
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Entry
M0R89_18455 CDS
T08097
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
halx
Halorussus limi
Pathway
halx03022
Basal transcription factors
halx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
halx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
M0R89_18455
09124 Replication and repair
03420 Nucleotide excision repair
M0R89_18455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halx03021
]
M0R89_18455
03400 DNA repair and recombination proteins [BR:
halx03400
]
M0R89_18455
Enzymes [BR:
halx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M0R89_18455
Transcription machinery [BR:
halx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
M0R89_18455
DNA repair and recombination proteins [BR:
halx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
M0R89_18455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UPV76670
UniProt:
A0A8U0I072
LinkDB
All DBs
Position
unnamed1:31805..33667
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AA seq
620 aa
AA seq
DB search
MDGDDSADADDSTDTNDPVDVEDFHDAVEQYGRPVVTAEEVARALDRSQAETDGALAGLA
EGEGVERLDVSNDPVVWYPTDWGKLADRERVVVFPKRRELVVDQPTQFTRAQLSQFAHLV
DTTRDGGYMYEIRQEDVWAAPFDDFESLLGTVRDVLPERSPHLEEWIEGQWKRARQFVLR
TDEEDGYVVLEAASEDLMGNVARQKLDAGQLRAPLSDTESWVAEESVAEVKRVLYEAGYP
VRDERDLETGEELDVQLKLRLRDYQQEWVDQFVATKSGVLVGPPGSGKTVAGMGAIEAVG
GETLILVPGRELASQWHDELLAHTTLSPDQIGEYHGGAKDVRPVTIATYQTAGMDRHRQL
FDQREWGLIVYDEVHHVPSKVFRRSADLQSKHRLGLSATPVREDDKEEEIFTLIGPPIGT
DWDALFEAGYVQEPEVQIRYVPWDDETYRHEYGSAEGHEKRQLAASNPAKLDEIRHLRAE
YPHAKTLIFVEYLDQGDRLAEALNVPFISGEMRHARREHLLQEFKSGERDTLVVSRVGDE
GIDLPDAELAIVASGLGGSRRQGAQRAGRTMRPTGNSRMFVLATRGTTEEDFARRRMQHL
SAKGVRVTEQSAQAVEDRRP
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
gtggacggggacgactcggcagacgcagacgactcgacggatacgaacgacccggtggac
gtggaggacttccacgacgccgtcgagcagtacggccggccggtcgtcaccgccgaggag
gtggcccgcgcgctcgaccgttcgcaggccgagactgacggcgcgctggcgggtctcgcg
gagggcgagggcgtcgagcggctcgacgtgtcgaacgaccccgtggtctggtatccgacc
gactgggggaaactcgccgaccgcgagcgcgtggtcgtctttccgaagcgccgcgaactg
gtcgtggaccaaccgacccagttcacgcgggcgcaactctcgcagttcgctcacctcgtg
gacaccacgcgcgacggcggctacatgtacgagattcgccaagaggacgtgtgggccgcg
ccgttcgacgacttcgagagtctgctcggcaccgtccgggacgtgctccccgagcggtcg
ccccacctcgaagagtggatagagggccagtggaagcgcgctcgccagttcgtcctccgg
accgacgaggaggacggctacgtcgtcctcgaagccgcgagcgaggacctgatgggcaac
gtcgcgcgccagaaactcgacgcgggccagttgcgcgcgcccctctcggacaccgagagt
tgggtcgccgaggagtcggtcgccgaggtcaagcgcgtcctctacgaggccgggtatccg
gtccgcgacgaacgcgacctcgaaaccggcgaggaactcgacgtccaactcaaactccgc
ctccgcgactaccagcaggagtgggtcgaccagttcgtggcgaccaagtcgggcgtcctc
gtcggtccgccggggagcggcaagaccgtggccgggatgggcgcgatagaggcggtcggc
ggcgagaccctgattctggtgccgggccgggaactcgccagtcagtggcacgacgaactg
ctcgcgcacacgacgctctcgcccgaccaaatcggcgagtaccacggcggcgcgaaggac
gtgcgccccgtcacgattgcgacctaccagaccgccgggatggaccgccaccgtcagcta
ttcgaccagcgcgagtggggcctcatcgtctacgacgaggtccaccacgtgccgtcgaag
gtgttccgccggtcggcggacctccagagcaagcaccgcctcggcctctcggccacgccg
gtccgcgaggacgacaaggaggaggagatattcacgctcatcggcccgcccatcggcacc
gactgggacgcgctgttcgaggccggctacgtccaagaacccgaggtacagattcgctac
gtgccgtgggacgacgagacctaccgccacgagtacgggagcgcggagggacacgagaag
cgccaactcgccgcgagcaaccccgcgaaactcgacgagattcgccacctgcgcgccgag
tacccccacgccaagaccctgatattcgtggagtacctcgaccaaggcgaccgactggcc
gaggcgctcaacgtcccgttcatctcgggcgagatgcgccacgcccggcgcgagcatctg
cttcaggagttcaagtcgggcgagcgcgacaccttggtcgtctcgcgggtcggcgacgag
ggcatcgacctgcccgacgccgaactcgccatcgtggcctccggactcggcggttcccgg
cggcagggcgcacagcgcgcgggccggacgatgcgaccgaccggcaactcccgcatgttc
gtcctcgccacgcgggggacgaccgaggaggacttcgcgcgccgtcgcatgcaacacctc
tcggcgaagggcgtccgcgtgaccgaacagagcgcgcaagcggtcgaggaccggcggccg
taa
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