Halorussus limi: M0R89_20080
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Entry
M0R89_20080 CDS
T08097
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halx
Halorussus limi
Pathway
halx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
M0R89_20080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halx03021
]
M0R89_20080
Transcription machinery [BR:
halx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
M0R89_20080
Prokaryotic type
Archaeal type
TFB
M0R89_20080
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Sigma70_r4
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
UPV76462
UniProt:
A0A8U0HZ69
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All DBs
Position
unnamed1:complement(387583..388548)
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AA seq
321 aa
AA seq
DB search
MTGPIRQREREQGVETEQGESENVQTCPECEAGNLVADAGGSELVCEDCGLVVEERNVDR
GPEWRAFNHQERQSKSRVGAPTTNTMHDKGLTTTIDWKNKDAYGRSLSSEKRSQMHRLRK
WQERIRTKDAGERNLQFALSELNRMSSALGVPRSVQEVSSVIYRRALKEDLIRGRSIEGV
ATAALYASCRKEGIPRSLEEVSEVSRVERKEIGRTYRYISQELALGMEPVDPKKYVPRFC
SELDLTEEVESKANEIIDVTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQ
VTEVTIRNRYQEQIKAIGLYN
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggccaatccgccagcgagagcgtgagcaaggggtcgagaccgagcagggggaa
tccgagaacgtccagacgtgtccggagtgcgaggccggcaatctggtcgcggacgctggc
ggaagcgagttagtctgcgaggactgcggactcgtcgtggaggagcgcaacgtggaccgg
ggccccgagtggcgcgcgttcaaccatcaggagcgccagagcaagagtcgcgtcggcgcg
cccacgacgaacacgatgcacgacaagggcctgacgacgaccatcgactggaagaacaag
gacgcctacggccggtcgctctcctcggagaaacggagtcaaatgcaccgcctccggaag
tggcaggagcgaatccgcacgaaggacgcgggcgagcggaacctccagttcgccctgagc
gaactcaaccgtatgtcgtcggcgctcggcgtcccgcggtcggtacaggaagtgtcgtcg
gtcatctaccggcgcgcgttgaaggaggacctcatccgaggtcgctccatcgagggcgtc
gccaccgccgcgctgtacgcgtcctgccggaaggaaggcatcccgcgaagcctcgaagag
gtctcggaggtctcgcgggtcgagcgaaaggaaatcggtcgaacgtatcgctacatctcc
caggagctcgcgctcgggatggaaccggtcgaccccaagaagtacgtcccgcggttctgc
tcggaactcgacctgaccgaggaagtcgagagcaaggccaacgagataatcgacgtgacc
gccgagaagggcctgctctcgggcaagtccccgacggggtacgcggccgcggcgatttac
gcggcctcgctgctctgcaacgagaagaagacccagcgcgaggtcgccgacgtggcgcag
gtgacggaagtcaccatccgcaaccggtatcaggagcagataaaggccatcggactttac
aactaa
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