Halorussus limi: M0R89_22005
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Entry
M0R89_22005 CDS
T08097
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
halx
Halorussus limi
Pathway
halx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
M0R89_22005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halx03021
]
M0R89_22005
Transcription machinery [BR:
halx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
M0R89_22005
Prokaryotic type
Archaeal type
TFB
M0R89_22005
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
HTH_24
DZR_2
RB_B
DUF8122
DUF7129
Motif
Other DBs
NCBI-ProteinID:
UPV77093
UniProt:
A0A8U0I215
LinkDB
All DBs
Position
unnamed3:70365..71324
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AA seq
319 aa
AA seq
DB search
MATRDIYESGFDEDVRTESSANQCPECDGRVTTNAVETVCEDCGLVINEQRIDHGPEWRA
YDDEECERTGAPLTAARHDRGLSTEIGYGTDANGNELSGQKRRRLARMRREQTRGRWRSK
AERNLAHGLGEVRRLASALGLSDSVHDQACQLFRSAQNEDLLRGRSIEAIAAASVYGACR
CNGLSRLVGEVSEMARVAESRVTNAYKVLNEELGLPAEPVSPSMFVPRLASDLECPDKIR
QRARTLAEQAEEHGVTTGVHPAGFAAACLYKAGREEGRWLTQSDVAESGNVTPTTVRTHH
QTLEEQVARQRPCTNTAVR
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccagagacatctacgaaagcggattcgacgaagacgtccgaacggaatcaagt
gcgaaccagtgtcccgagtgcgacggccgggtcaccacgaacgcggtcgaaacagtctgc
gaggactgtgggctggtcatcaacgagcagcgtatcgatcacgggccggagtggcgggcg
tacgacgacgaggagtgcgaacgaaccggcgccccacttactgcggctcgccacgatcgc
ggcctgtcgacggaaatcggttacggcaccgacgcgaacgggaacgaactctccggacag
aagcgacggcgactcgcccggatgcgccgtgagcagacccgaggtcgctggcgatcgaaa
gcggaacggaatctcgcacacggcttgggcgaggtgcgccgcttagcaagtgccctcggc
ctctccgattcggttcatgaccaggcgtgtcagctcttccggagcgcccagaacgaggat
ctgcttcgtggcaggtccatcgaggccatcgccgcggccagcgtgtacggagcctgccgg
tgcaacggcctctcgcggttggtaggcgaggtcagtgagatggcccgcgtcgcggagtcg
cgagtcacgaatgcgtacaaggtgctgaacgaagagttggggctccctgccgagcccgtc
tcccccagtatgttcgtgccgcgactcgcctcggacctcgagtgtccggacaagatccgt
caacgggcccgaacgctcgcggagcaggccgaggagcacggcgtcacaacgggtgtccat
ccggctgggttcgcagcggcttgtctctacaaggccggtcgcgaagaaggccgatggctg
acgcaaagtgacgtcgccgagtccgggaacgtcacgccaacaactgtccggacgcatcac
cagacactagaggaacaagtagcccgacaacgcccctgtacaaatacggccgttagataa
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