Natrinema halophilum: HYG82_12370
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Entry
HYG82_12370 CDS
T06745
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
haly
Natrinema halophilum
Brite
KEGG Orthology (KO) [BR:
haly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haly03016
]
HYG82_12370 (endA)
Enzymes [BR:
haly01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
HYG82_12370 (endA)
Transfer RNA biogenesis [BR:
haly03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
HYG82_12370 (endA)
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
QLG49597
UniProt:
A0A7D5KRR2
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All DBs
Position
2574739..2575809
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AA seq
356 aa
AA seq
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MALEGRFDDGVVRVGGDARQRYHDSRGYGYPLDGNEIALAPVEAAHLLYRGDLEAVVDVE
SGERLEFREFVAREPGLDFGVRFLVYADLRSRGFYLSPAAEPWIPNPPGSEADFAVFPRG
KGPRDGDIAYALRIIGERTDIPASELREGVLAVVDEESEITYFKIDRRNPTGTSDTGGEM
PANCEADLLADRVVIWDPPLELYERAFYGQPLEGREYDRPTLQCSLLEATYLAERGALSL
EPETVRKRGREVEGERFDRRLTVYSVLRERGVVPKTGYKFGADFRTYADVESVENLGHSE
LLVRVHPAAYVFEPRDLALDVRLAHGVRKTMVFALVSGESDEDGGIEWWSLERLTP
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcactcgaggggcggttcgacgacggcgtcgtccgcgtcggaggcgacgcacgccag
cggtatcacgactcgcggggctacggctatccgctcgacgggaacgaaatcgctctcgcg
cccgtcgaggcggctcacctgttgtatcgaggggatctcgaggcagtcgtcgacgtcgag
agcggcgagcgactcgaatttcgggagttcgtggctcgcgaacccgggctcgacttcggc
gttcggttcctcgtctacgcagatctgcggtcgcggggattctacctctcaccggccgcg
gagccgtggattccgaatccacccggcagtgaggcggacttcgccgtgttccctcggggg
aaagggccgagagacggcgacattgcgtacgcgttacgaatcattggcgagcgaaccgat
attccagccagcgaactccgagagggcgtcctggcggtcgtcgacgaggagagcgaaatc
acctacttcaagatcgaccgccgaaatccgaccggaacgtcggacaccggcggcgagatg
ccggcgaactgcgaggcggacctcctcgccgatcgagtggtcatctgggaccccccactc
gaactctacgaaagagcgttctacggccagcccctagagggacgggaatacgaccggccg
acgctacagtgttccctgctcgaggcgacgtacctcgccgaacgaggtgcactttccctc
gagcccgagacggtccgcaaacgagggcgggaggtcgaaggagagcggttcgatcggcga
ctgacggtctacagtgtgctgcgggaacggggagtcgtccccaaaacgggatacaagttc
ggcgcggattttcggacgtacgccgatgtcgaatccgtagaaaacctcggtcactccgag
ttgctcgtccgcgtccatccggcggcgtacgtcttcgaaccgcgcgatctggcgctcgac
gtccggctcgcacacggcgttcgaaagacgatggtattcgcgctcgtgagtggtgagtcc
gacgaagacgggggaatcgagtggtggtcactcgaacggctcacgccgtga
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