Natrinema halophilum: HYG82_12885
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Entry
HYG82_12885 CDS
T06745
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
haly
Natrinema halophilum
Pathway
haly03410
Base excision repair
haly03430
Mismatch repair
haly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HYG82_12885
03430 Mismatch repair
HYG82_12885
03440 Homologous recombination
HYG82_12885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haly03400
]
HYG82_12885
DNA repair and recombination proteins [BR:
haly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HYG82_12885
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HYG82_12885
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HYG82_12885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
DUF2529
Motif
Other DBs
NCBI-ProteinID:
QLG49693
UniProt:
A0A7D5GNU9
LinkDB
All DBs
Position
2693174..2694703
Genome browser
AA seq
509 aa
AA seq
DB search
MTGPVPELEDRAIACAKRLCAADRVLLASHIDADGLTSAAIAAQALERAGIPFETVFEKQ
LDEDAISAIADTDYDTVLFTDFGSGQLDVIGEYEDAGDLTPVIADHHQPADRETDYHLNP
LLFGINGASELSGAGASYVLARALADVCSGSRAAAADGGERVDESRSSSEHRSDGGAVAE
STGPTARADNRDLAALAVVGAVGDMQAAGGELHGANAEIVAEGVEAGVIETGKDLALYGK
QTRPLPKLLEYATDVHIPGISNDANGALRFLDELDLELKRDGEWRRWAGLTSEEKQTVAS
ALVRRAVSRGVPATKIDGLVSTAYVLSEESVGTELRDASEFSTLLNATARYERADVGLSV
CLGDRGGALERARQLLREHRRNLSNGIDLVTREGVTQEDHVQWFHAGDRIRETIVGIVAG
MAMGNAGISRSKPIVAFADKNDEEVKVSARGTHSLVRKGLDLSIVMGDASRAIGGDGGGH
DVAAGATVPKGNEEAFVERADEIVGEQLS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgacagggccggttcccgaactcgaggatcgcgcgatagcgtgtgccaagcggttgtgt
gcggccgatcgcgtgctgctcgcctcccacatcgacgcggacgggctgacgagcgccgcg
atcgccgcgcaggcgctcgagcgggcggggatcccgttcgagacggtcttcgagaagcaa
ctcgacgaagacgcgatcagcgcgatcgcggacaccgactacgacaccgtcctgttcacc
gacttcgggagcggccagctcgacgtgatcggcgaatacgaggacgcaggcgatctaacc
ccggtcatcgcggaccaccaccagcccgccgaccgggagacagactaccacctcaacccg
ctcctgttcggtatcaacggcgcttcggaactgtcgggcgccggtgcgagttacgtcctc
gcacgggcgctcgcggacgtgtgcagtggttcccgggccgctgcagccgacggcggtgaa
cgagtcgacgaatcgcggtcctcgtcggaacaccgttccgacggcggagccgtcgccgaa
tcgacggggcccacagcccgcgccgacaaccgcgatctggccgctctcgcagtggtcggc
gccgtcggcgacatgcaggccgccggcggcgaactccacggcgcaaacgcggagatcgtc
gcagagggcgtcgaggccggcgtcatcgagaccggcaaggacctcgcgctctacgggaaa
cagacccggccgctcccgaaactgctcgagtacgccaccgacgtccacatccccggcatc
tcgaacgatgcgaacggcgcgctgcgcttcctggacgaactcgatctcgagttgaaacgc
gacggcgaatggcggcgctgggccggcctcacgagcgaggaaaaacagaccgtcgccagc
gcgctcgttcgacgggccgtctcgcggggcgtccccgcgacgaagatcgatgggctcgta
agcactgcctacgtcctgagcgaggaatccgtcggaacggaactgcgggacgcgagcgag
ttttcgaccctgctcaacgcgactgcccggtacgagcgcgccgacgtcggtctcagcgtc
tgtctcggcgatcgaggcggcgcgctcgagcgcgcacgccagctcctgcgcgagcaccgg
cgaaacctctcgaacgggatcgatctcgtcacccgcgagggggtcacacaggaagaccac
gtgcagtggttccacgccggcgatcgcattcgcgagacgatcgtcggcatcgtcgcgggg
atggcgatgggcaacgcggggatcagccgctcgaagccgatcgtcgcgttcgcggacaag
aacgacgaggaagtgaaggtctctgccagaggaactcactccctcgttcgcaaggggctc
gacctctcgatcgtgatgggagatgcgtcccgcgccatcggtggcgacggcggcggtcac
gacgtcgccgcgggcgcgacggtcccgaaaggaaacgaagaagcgttcgtcgaacgtgcc
gacgagatcgtcggcgaacaactctcctga
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