Natrinema halophilum: HYG82_17760
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Entry
HYG82_17760 CDS
T06745
Name
(GenBank) GAF domain-containing protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
haly
Natrinema halophilum
Brite
KEGG Orthology (KO) [BR:
haly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haly03000
]
HYG82_17760
Transcription factors [BR:
haly03000
]
Prokaryotic type
Helix-turn-helix
Other families
HYG82_17760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
HTH_10
GAF_2
Response_reg
GAF
GAF_3
Sigma70_r4_2
HTH_24
GerE
Sigma70_r4
HTH_20
Motif
Other DBs
NCBI-ProteinID:
QLG50559
UniProt:
A0A7D5KKL5
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Position
3737939..3739633
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AA seq
564 aa
AA seq
DB search
MSETDFQSAGEEDPETADALRILLIEDNPGDARLIQEMLRDTEELAQRVKPSDEAGTRPD
ISRKTRLEDGLEAVEASSIDIVLLDLNLPDSEGLKTLETVHAETAETPIVVLTGVRDQQV
GVKALQRGAQDFLVKDEVTSELLVRTIHHAIERANQEQERRQQREQLEALNRLNRIGHDI
THAVITTETRAELEQQVCDRLAESDAYRFAWIGGVNPGSDTVIPQAAAGDEDGYLDEIEI
TVDDEHESGQGPAGTAIRTGRVQVMNDAESASNFEPWREAAQARGYRSSAAIPIIHEDLV
YGVLGVYSSSPRAFTGPETNVLARVGDVVAHAITAIERRDALVSDAVVELEFRVDAMAEP
LVELSTAESCTIEFEQLVGGDETLLAYGSARGVSQEALTDTIDRTDGLGDVRFLTTRRDE
SEFELVAPAAVSLFETIATHGGRVASATIEDGEFRFVVELPRGRDTRRMIELIKDRRDDV
TYLAQRTVERSERTDSGSPSVLEEELTDKQRAALETAYFAGYFDWPRGSTGEEIADRLGI
APATFNQHLRTAERKFFSSVLGDR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaacggacttccaatccgccggtgaagaggacccggaaacggccgacgcgctt
cgcatcctcctgatcgaggacaatcccggcgacgctcgcttgatccaggagatgctccgg
gataccgaggaactcgcacagcgagtcaaaccctccgacgaagcgggaacgagaccggac
atctcccgaaaaacccgcctcgaggacgggctcgaagcggtcgaagccagttccatcgac
atcgtccttctcgatctcaacctccccgacagcgagggactcaaaacgctcgagaccgtc
cacgcggaaacggcggagacgcccatcgtcgtcctgaccggcgtccgagatcagcaagtc
ggcgtcaaagcgctccagcgcggtgcccaggacttcctcgtcaaagacgaagtgacgagc
gaactgctggtgcggacgattcaccacgcgatcgaacgcgccaatcaagagcaggagcga
cgccagcagcgcgagcaactcgaagcgctgaaccgactcaatcggatcggccacgacatc
acgcacgcggtgatcacgacggaaacgcgggcggaactcgaacagcaagtctgcgatcga
ctcgccgagtccgacgcctaccggttcgcgtggatcggtggagtcaatccgggcagtgac
accgtaattccgcaggcggcggccggcgacgaggacgggtatctcgatgagatcgagatc
acggtcgacgacgagcacgaatcgggtcagggaccggccggaacggcgattcggaccggt
cgggttcaggtcatgaacgacgccgaatccgcgtccaatttcgagccgtggcgagaggcc
gcacaggcccgcggctaccggtcgtcggcggcgattccgatcatccacgaagacctcgtc
tacggcgtactgggcgtgtattcgtcgtcgccgcgagcgttcacagggccggagacgaac
gtcctcgcccgcgtgggcgacgtcgtcgcccacgcgatcacggcaatcgagcgcagagac
gccctggtcagcgatgccgtcgtcgaactcgagtttcgcgtcgatgcgatggccgaaccg
ctggtcgaactctcgacggccgagtcgtgtacgatcgaattcgaacaactggtcggcggc
gacgagacgctactggcctacggttctgcacgcggcgtctcgcaagaggcgcttaccgat
accatcgatcgaaccgacgggctcggcgacgttcgattcctcacgaccagacgcgacgag
tccgagttcgaactcgtcgcgcctgcagccgtctccctgttcgagacgatcgccacacac
ggcggccgcgtcgcgtcggcgacgatcgaggacggggagtttcgcttcgtcgtcgaactc
ccgcgcggtcgagacacccgccggatgatcgaactgatcaaggacagacgagacgacgtc
acctacctcgcccagcgcacagtcgagcgaagcgagcgcaccgattccggttcgccgtca
gtcctcgaggaagaactgaccgacaagcaacgagcagccctcgagactgcctacttcgcg
ggctacttcgactggccccgcgggagtaccggcgaagaaatcgccgatcgactcggtatc
gcgccggcgaccttcaaccagcatctccgcacggcagagcggaaattcttcagttcggtg
ctcggggaccggtag
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