Natrinema halophilum: HYG82_18015
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Entry
HYG82_18015 CDS
T06745
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
haly
Natrinema halophilum
Pathway
haly03030
DNA replication
haly03420
Nucleotide excision repair
haly03430
Mismatch repair
haly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYG82_18015
03420 Nucleotide excision repair
HYG82_18015
03430 Mismatch repair
HYG82_18015
03440 Homologous recombination
HYG82_18015
03460 Fanconi anemia pathway
HYG82_18015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haly03000
]
HYG82_18015
03032 DNA replication proteins [BR:
haly03032
]
HYG82_18015
03400 DNA repair and recombination proteins [BR:
haly03400
]
HYG82_18015
Transcription factors [BR:
haly03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
HYG82_18015
DNA replication proteins [BR:
haly03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
HYG82_18015
DNA repair and recombination proteins [BR:
haly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
HYG82_18015
MMR (mismatch excision repair)
HYG82_18015
DSBR (double strand breaks repair)
HR (homologous recombination)
HYG82_18015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
OB_MEIOB_N
Ssb-like_OB
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QLG50600
UniProt:
A0A7D5L010
LinkDB
All DBs
Position
3786330..3787778
Genome browser
AA seq
482 aa
AA seq
DB search
MSDIEGVYEDLEADVSLEEFREAVEAKVEQMGGLADEETAAMLVAHEIGESEVGGIADIE
PGMEEAKFVAKVTSIGEVRTFERDSEDEDGQVVNVEVADETGSVRAAFWDDHAEAAIEEL
EEGQVLRIKGRPKEGFSGVEVSVDDVEPDDETEIDVTISDTHTVEELSLGLSNVNLVGVL
LDTDSVRTFDRDDGSEGKVSNLVLGDPTGRIRVTLWDERADQATKLEVGTTVEVIDGYVK
ERDGTLELHVGNRGAVEEVDEEVEYVPESTSIEDLEIDQTVDIAGVVRSADPKRTFDRDD
GSEGQVRNIRVQDATDDIRVALWGEKADIDLGPGDEVALGDVEIQDGWQDDLEASAGWQS
TITVLESDSSSTNAGESGSDSSDENAGLSAFAGDTGAGEDTDDVGEDEKDGDSVSADDST
DDPADGETFEFTGVVVQAGDPIVLDDGEKTMSVATDADVGLGEEVTARGVVRDGRLEAND
VF
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatcgagggcgtatacgaggacctcgaggccgacgtctccctcgaggagttt
cgcgaggccgtcgaggcgaaagtcgagcaaatggggggactcgcggacgaggagacggcg
gcaatgctcgtcgctcacgagatcggcgagagcgaggtcggtggcatcgccgacatcgag
cccggaatggaggaagccaagttcgtcgccaaagtaacgtcgatcggtgaggtgcgtacg
ttcgagcgcgacagcgaagacgaggacggccaggtcgtcaacgtcgaggtcgcggacgaa
acaggttctgtgcgggcggcattctgggacgatcacgccgaagcggctatcgaggaactc
gaggaaggacaggttttgcgcatcaaaggccgaccgaaggaagggttcagcggtgtcgaa
gtgagcgtcgacgacgtggaacccgacgacgagacggagatcgacgttacgatttccgat
acgcataccgtcgaggagctctcgctcggtctctcgaacgtcaatctcgtcggagtgctt
ttggacactgatagcgtccggaccttcgaccgagacgacggttccgaggggaaggtttcg
aacctcgttctcggcgatccgaccggccgcatccgcgttacactctgggacgagcgagcc
gatcaagcaacgaaattggaagttggaactacagtcgaggtgatcgacgggtacgtgaaa
gaacgtgacggaaccctcgaacttcacgtgggcaaccgcggcgccgtcgaggaagtcgac
gaggaggtcgagtacgtcccggaaagcacgtcaatcgaggatctcgagatcgaccagacg
gtcgacatcgcgggagtcgtccgttcggccgacccgaagcgaacgttcgaccgtgacgac
ggctccgaaggacaggtccgaaatattcgcgttcaggacgcgactgacgacattcgcgtc
gcactctggggcgagaaagccgacatcgatcttggaccgggcgacgaagtcgccctcggc
gacgtcgagatccaggacggctggcaagatgacctcgaggcctccgccggctggcaatcg
acgattacggtccttgaatccgattccagtagtacgaacgctggtgagagtggcagcgac
tcgagcgacgagaacgccgggttatcggcgttcgctggtgataccggagccggcgaggac
acggatgacgtcggtgaggacgagaaagacggggactcggtcagcgccgacgacagtacg
gatgacccggcagacggcgaaacgttcgaattcaccggggtagtggtacaggccggcgat
ccgatcgtgctcgacgacggcgagaaaaccatgagcgtcgcgaccgacgccgacgtcggt
ctcggtgaggaagtaactgcacgaggagtcgtccgcgacggccgcctcgaagcaaacgac
gtgttctga
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integrated database retrieval system
